Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01433	hp1	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0078	CLM	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0212	CLM	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01433	hp2	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0001	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01433	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0174	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01433	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0224	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01433	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0337	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01433	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0094	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01433	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0032	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CLM	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01433	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0247	CLM	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01433	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0270	CLM	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01433	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0086	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	CLM	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CLM	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01433	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0002	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01433	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0016	CLM	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01433	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0037	CLM	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG01433	hp1	a0003	a0003c0020	a0003c0020t0084	a0003c0020t0084g0105	CLM	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01433	hp2	a0002	a0002c0002	a0002c0002t0044	a0002c0002t0044g0041	CLM	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01433	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0013	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	CLM	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CLM	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01433	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01433	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0176	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01433	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0348	CLM	AMR	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01433	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01433	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0063	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01433	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0267	CLM	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01433	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0056	CLM	AMR	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	HG01433	hp1	a0002	a0002c0005	a0002c0005t0003	a0002c0005t0003g0070	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01433	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0231	CLM	AMR	ABAT	chr16	8669617	8789570