Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02004	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02004	hp2	a0001	a0001c0001	a0001c0001t0017	a0001c0001t0017g0077	PEL	AMR	A1BG	chr19	58340183	58358492
A4GALT_chr22_42687121_42725870	HG02004	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0034	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02004	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0362	PEL	AMR	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG02004	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0311	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02004	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0005	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02004	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0004	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02004	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0136	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02004	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0092	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	PEL	AMR	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0115	PEL	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02004	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0183	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0334	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02004	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0220	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02004	hp2	a0002	a0002c0002	a0002c0002t0128	a0002c0002t0128g0237	PEL	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02004	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARSD1_chr17_42945526_42969454	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG02004	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PEL	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02004	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0110	PEL	AMR	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG02004	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0160	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0285	PEL	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02004	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0300	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02004	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0152	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02004	hp1	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0321	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02004	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0050	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02004	hp1	a0001	a0001c0016	a0001c0016t0002	a0001c0016t0002g0090	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02004	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0173	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG02004	hp1	a0007	a0007c0003	a0007c0003t0003	a0007c0003t0003g0014	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02004	hp2	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0069	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG02004	hp1	a0003	a0003c0021	a0003c0021t0001	a0003c0021t0001g0079	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02004	hp2	a0001	a0001c0022	a0001c0022t0002	a0001c0022t0002g0026	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0219	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG02004	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0076	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG02004	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0136	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02004	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0228	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	HG02004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG02004	hp2	a0010	a0010c0012	a0010c0012t0002	a0010c0012t0002g0139	PEL	AMR	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	HG02004	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0076	PEL	AMR	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	HG02004	hp2	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0277	PEL	AMR	ABCA9	chr17	68969488	69065927