Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG02148	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0104	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02148	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0005	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02148	hp2	a0004	a0004c0047	a0004c0047t0004	a0004c0047t0004g0093	PEL	AMR	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG02148	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0202	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02148	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0295	PEL	AMR	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG02148	hp1	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0108	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02148	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0290	PEL	AMR	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0158	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0241	PEL	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02148	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0010	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02148	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	PEL	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02148	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0019	PEL	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02148	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0148	PEL	AMR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02148	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0028	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02148	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0224	PEL	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0337	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02148	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0263	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02148	hp2	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0092	PEL	AMR	AARS1	chr16	70247298	70294506
AASDH_chr4_56333290_56392491	HG02148	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0294	PEL	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02148	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0180	PEL	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02148	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02148	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0031	PEL	AMR	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	HG02148	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0299	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02148	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0162	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02148	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0267	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02148	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0207	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG02148	hp1	a0003	a0003c0002	a0003c0002t0002	a0003c0002t0002g0040	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02148	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG02148	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02148	hp2	a0001	a0001c0022	a0001c0022t0002	a0001c0022t0002g0026	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02148	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0250	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02148	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0061	PEL	AMR	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	HG02148	hp1	a0004	a0004c0046	a0004c0046t0001	a0004c0046t0001g0104	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG02148	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0258	PEL	AMR	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG02148	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0038	PEL	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02148	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0304	PEL	AMR	ABCA5	chr17	69239311	69332133