Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PUR	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01099	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PUR	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01099	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0089	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01099	hp2	a0003	a0003c0005	a0003c0005t0003	a0003c0005t0003g0091	PUR	AMR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG01099	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0165	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01099	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0254	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01099	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0066	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01099	hp2	a0001	a0001c0002	a0001c0002t0014	a0001c0002t0014g0040	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	PUR	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01099	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PUR	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01099	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0130	PUR	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01099	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0160	PUR	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01099	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0292	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01099	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01099	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0014	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01099	hp2	a0002	a0002c0002	a0002c0002t0037	a0002c0002t0037g0004	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01099	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0249	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01099	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0093	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01099	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	PUR	AMR	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	HG01099	hp1	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0115	PUR	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01099	hp2	a0002	a0002c0002	a0002c0002t0145	a0002c0002t0145g0275	PUR	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01099	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01099	hp2	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0009	PUR	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01099	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	PUR	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01099	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PUR	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01099	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0173	PUR	AMR	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01099	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01099	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0218	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01099	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0280	PUR	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01099	hp2	a0002	a0002c0002	a0002c0002t0007	a0002c0002t0007g0148	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01099	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0057	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01099	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0251	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01099	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0251	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01099	hp2	a0005	a0005c0005	a0005c0005t0004	a0005c0005t0004g0214	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG01099	hp1	a0004	a0004c0096	a0004c0096t0007	a0004c0096t0007g0020	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01099	hp2	a0010	a0010c0007	a0010c0007t0010	a0010c0007t0010g0201	PUR	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01099	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0185	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG01099	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	PUR	AMR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG01099	hp2	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0174	PUR	AMR	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	HG01099	hp1	a0002	a0002c0001	a0002c0001t0004	a0002c0001t0004g0182	PUR	AMR	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG01099	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0021	PUR	AMR	ABCA5	chr17	69239311	69332133