Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18949	hp1	a0002	a0002c0017	a0002c0017t0002	a0002c0017t0002g0323	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18949	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0273	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18949	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0233	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18949	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0033	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18949	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18949	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0070	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18949	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0046	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18949	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0317	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18949	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18949	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18949	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0072	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18949	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0077	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18949	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18949	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0249	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18949	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0225	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18949	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18949	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0163	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18949	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0026	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18949	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18949	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18949	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0232	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18949	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0243	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18949	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0053	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18949	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0275	JPT	EAS	AATK	chr17	81112295	81171221
ABCA1_chr9_104776006_104933155	NA18949	hp1	a0007	a0007c0003	a0007c0003t0009	a0007c0003t0009g0260	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18949	hp2	a0008	a0008c0006	a0008c0006t0014	a0008c0006t0014g0221	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA5_chr17_69239311_69332133	NA18949	hp1	a0001	a0001c0006	a0001c0006t0007	a0001c0006t0007g0054	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18949	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0214	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA9_chr17_68969488_69065927	NA18949	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0100	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0220	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA18949	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0036	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18949	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0245	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	NA18949	hp1	a0020	a0020c0015	a0020c0015t0001	a0020c0015t0001g0080	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18949	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0240	JPT	EAS	ABCB1	chr7	87498017	87605884