Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A3GALT2_chr1_33301766_33326098	NA18952	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18952	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0017	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18952	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0330	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18952	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0203	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0143	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18952	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0300	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18952	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0045	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18952	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0143	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18952	hp2	a0001	a0001c0001	a0001c0001t0029	a0001c0001t0029g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18952	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18952	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18952	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18952	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0107	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18952	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18952	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18952	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0003	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18952	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18952	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0255	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18952	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18952	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18952	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18952	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0113	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18952	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0066	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	AATK	chr17	81112295	81171221
ABCA2_chr9_137002234_137033237	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18952	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0169	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA18952	hp1	a0007	a0007c0011	a0007c0011t0002	a0007c0011t0002g0288	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18952	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0142	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18952	hp1	a0007	a0007c0006	a0007c0006t0002	a0007c0006t0002g0055	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18952	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0252	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB10_chr1_229511582_229563707	NA18952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18952	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0080	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	NA18952	hp1	a0002	a0002c0004	a0002c0004t0005	a0002c0004t0005g0070	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0270	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	NA18952	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0157	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18952	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0022	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB5_chr7_20610667_20762008	NA18952	hp1	a0003	a0003c0010	a0003c0010t0002	a0003c0010t0002g0316	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18952	hp2	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0233	JPT	EAS	ABCB5	chr7	20610667	20762008