Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18962	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0014	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18962	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0182	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18962	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0194	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18962	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0266	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18962	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0160	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18962	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0102	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0193	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18962	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0344	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18962	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0168	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18962	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0026	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18962	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0152	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18962	hp1	a0012	a0012c0029	a0012c0029t0044	a0012c0029t0044g0012	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18962	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0030	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0262	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18962	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18962	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0283	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18962	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0100	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0362	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0222	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18962	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18962	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18962	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18962	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0316	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18962	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0008	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18962	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0266	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA18962	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0175	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18962	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0016	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA18962	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0133	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA18962	hp2	a0001	a0001c0009	a0001c0009t0010	a0001c0009t0010g0187	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA18962	hp1	a0003	a0003c0009	a0003c0009t0046	a0003c0009t0046g0219	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18962	hp2	a0007	a0007c0003	a0007c0003t0033	a0007c0003t0033g0035	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18962	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18962	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	JPT	EAS	ABCA3	chr16	2270881	2345728