Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18965	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0008	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18965	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0002	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18965	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0104	JPT	EAS	A2M	chr12	9062708	9120919
A4GNT_chr3_138118713_138137390	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18965	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18965	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0010	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18965	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18965	hp1	a0006	a0006c0015	a0006c0015t0011	a0006c0015t0011g0045	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18965	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AAGAB_chr15_67195667_67259661	NA18965	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0229	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18965	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0252	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18965	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0221	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18965	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0026	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18965	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0009	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0044	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18965	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0287	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18965	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18965	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0013	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18965	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0193	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA10_chr17_69143007_69233824	NA18965	hp1	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0104	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18965	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0090	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA6_chr17_69073702_69146895	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18965	hp2	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0137	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18965	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0163	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18965	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0117	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA18965	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0162	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0248	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB5_chr7_20610667_20762008	NA18965	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0271	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18965	hp2	a0003	a0003c0010	a0003c0010t0001	a0003c0010t0001g0327	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18965	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0067	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC1_chr16_15944616_16148053	NA18965	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0013	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC1_chr16_15944616_16148053	NA18965	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0222	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC5_chr3_183914934_184022884	NA18965	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0307	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18965	hp2	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0023	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCD1_chrX_153719856_153749755	NA18965	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	JPT	EAS	ABCD1	chrX	153719856	153749755