Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0238	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18967	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0153	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18967	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0189	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18967	hp1	a0001	a0001c0002	a0001c0002t0015	a0001c0002t0015g0051	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18967	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0238	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA18967	hp1	a0004	a0004c0018	a0004c0018t0003	a0004c0018t0003g0280	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18967	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0149	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18967	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18967	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0055	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA18967	hp1	a0002	a0002c0002	a0002c0002t0013	a0002c0002t0013g0110	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18967	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0154	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA18967	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0018	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0214	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18967	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18967	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA18967	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0054	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18967	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0247	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18967	hp1	a0002	a0002c0064	a0002c0064t0001	a0002c0064t0001g0269	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18967	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0079	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18967	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA1_chr9_104776006_104933155	NA18967	hp1	a0006	a0006c0004	a0006c0004t0006	a0006c0004t0006g0249	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18967	hp2	a0013	a0013c0013	a0013c0013t0002	a0013c0013t0002g0262	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18967	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0209	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18967	hp2	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0150	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18967	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0216	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18967	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0125	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18967	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0204	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0264	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18967	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0156	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB10_chr1_229511582_229563707	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18967	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0078	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB4_chr7_87396696_87480680	NA18967	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0086	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18967	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0147	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB7_chrX_75046048_75161283	NA18967	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0135	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA18967	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCB8	chr7	151023450	151052782