Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0056	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18979	hp1	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0311	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18979	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0130	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18979	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0065	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18979	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18979	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0033	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18979	hp1	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0209	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18979	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0229	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18979	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0312	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18979	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0185	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18979	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18979	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18979	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18979	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18979	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0152	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0305	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18979	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0244	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18979	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18979	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0035	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18979	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA18979	hp1	a0006	a0006c0020	a0006c0020t0001	a0006c0020t0001g0092	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18979	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0018	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18979	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0227	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18979	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0274	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18979	hp1	a0002	a0002c0002	a0002c0002t0017	a0002c0002t0017g0097	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18979	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0154	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18979	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18979	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0290	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA18979	hp1	a0042	a0042c0113	a0042c0113t0003	a0042c0113t0003g0093	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18979	hp2	a0004	a0004c0009	a0004c0009t0001	a0004c0009t0001g0116	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18979	hp1	a0006	a0006c0004	a0006c0004t0042	a0006c0004t0042g0265	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18979	hp2	a0008	a0008c0006	a0008c0006t0006	a0008c0006t0006g0057	JPT	EAS	ABCA1	chr9	104776006	104933155