Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A4GALT_chr22_42687121_42725870	NA18985	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0049	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18985	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0147	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18985	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18985	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18985	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0145	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0265	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18985	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18985	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0143	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0151	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0347	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARS2_chr6_44293731_44318347	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18985	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18985	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18985	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0005	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18985	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0032	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18985	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0034	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18985	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA18985	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0113	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0220	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA18985	hp1	a0003	a0003c0024	a0003c0024t0001	a0003c0024t0001g0191	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0214	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA18985	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0311	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18985	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0044	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA18985	hp1	a0007	a0007c0003	a0007c0003t0002	a0007c0003t0002g0037	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18985	hp2	a0014	a0014c0023	a0014c0023t0007	a0014c0023t0007g0115	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA18985	hp1	a0001	a0001c0017	a0001c0017t0001	a0001c0017t0001g0119	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18985	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0077	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA18985	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0116	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18985	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0139	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18985	hp2	a0002	a0002c0001	a0002c0001t0025	a0002c0001t0025g0224	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18985	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0212	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18985	hp2	a0008	a0008c0008	a0008c0008t0002	a0008c0008t0002g0136	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA18985	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0284	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18985	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0127	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB4_chr7_87396696_87480680	NA18985	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0061	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18985	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0233	JPT	EAS	ABCB4	chr7	87396696	87480680