Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A4GNT_chr3_138118713_138137390	NA19000	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19000	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL3_chr1_12711110_12733760	NA19000	hp1	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0041	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19000	hp2	a0006	a0006c0015	a0006c0015t0011	a0006c0015t0011g0024	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0172	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0245	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19000	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19000	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0005	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0320	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19000	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19000	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19000	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19000	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0032	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19000	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0174	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19000	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0173	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19000	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0308	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19000	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0327	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19000	hp1	a0002	a0002c0005	a0002c0005t0003	a0002c0005t0003g0180	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19000	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0116	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19000	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0270	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19000	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0054	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA19000	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0051	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19000	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0191	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA2_chr9_137002234_137033237	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19000	hp2	a0004	a0004c0010	a0004c0010t0001	a0004c0010t0001g0082	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA19000	hp1	a0007	a0007c0097	a0007c0097t0002	a0007c0097t0002g0100	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19000	hp2	a0002	a0002c0010	a0002c0010t0001	a0002c0010t0001g0176	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19000	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0261	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19000	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0124	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19000	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0155	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19000	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0206	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0225	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19000	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0055	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB5_chr7_20610667_20762008	NA19000	hp1	a0006	a0006c0007	a0006c0007t0001	a0006c0007t0001g0305	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0284	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA19000	hp1	a0010	a0010c0012	a0010c0012t0001	a0010c0012t0001g0044	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19000	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA19000	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782