Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19003	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0137	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0239	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19003	hp1	a0001	a0001c0008	a0001c0008t0002	a0001c0008t0002g0265	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19003	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19003	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0201	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19003	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0181	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19003	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0019	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19003	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0057	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19003	hp1	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19003	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0006	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19003	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0076	JPT	EAS	AADAC	chr3	151809116	151833488
AAMDC_chr11_77816144_77877352	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19003	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0048	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19003	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0326	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19003	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19003	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0141	JPT	EAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	JPT	EAS	AATF	chr17	36943954	37061871
ABCA5_chr17_69239311_69332133	NA19003	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0155	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19003	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0271	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	NA19003	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0097	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0224	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB11_chr2_168915781_169036324	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0234	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19003	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0269	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	NA19003	hp1	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0017	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19003	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0126	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB8_chr7_151023450_151052782	NA19003	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0070	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19003	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC2_chr10_99777640_99857594	NA19003	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0122	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0287	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA19003	hp1	a0012	a0012c0025	a0012c0025t0001	a0012c0025t0001g0151	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19003	hp2	a0006	a0006c0011	a0006c0011t0001	a0006c0011t0001g0269	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC6_chr16_16144565_16228494	NA19003	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0277	JPT	EAS	ABCC6	chr16	16144565	16228494
ABCC6_chr16_16144565_16228494	NA19003	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0222	JPT	EAS	ABCC6	chr16	16144565	16228494
ABCD2_chr12_39545033_39624803	NA19003	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19003	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	JPT	EAS	ABCD2	chr12	39545033	39624803