Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19004	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0198	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19004	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0077	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19004	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0192	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19004	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19004	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19004	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19004	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19004	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0123	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19004	hp2	a0001	a0001c0008	a0001c0008t0002	a0001c0008t0002g0238	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19004	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0036	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19004	hp1	a0008	a0008c0016	a0008c0016t0021	a0008c0016t0021g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19004	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0029	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19004	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA19004	hp1	a0001	a0001c0004	a0001c0004t0072	a0001c0004t0072g0093	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19004	hp2	a0001	a0001c0003	a0001c0003t0012	a0001c0003t0012g0091	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0211	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19004	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA19004	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0269	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19004	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19004	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0004	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0283	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19004	hp2	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0218	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA19004	hp1	a0014	a0014c0017	a0014c0017t0002	a0014c0017t0002g0274	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19004	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0315	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	NA19004	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0065	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19004	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0014	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19004	hp2	a0008	a0008c0014	a0008c0014t0001	a0008c0014t0001g0084	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	NA19004	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19004	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0189	JPT	EAS	ABCA6	chr17	69073702	69146895