Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19009	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19009	hp2	a0008	a0008c0012	a0008c0012t0001	a0008c0012t0001g0099	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19009	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0261	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19009	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0277	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA19009	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19009	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0011	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19009	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0163	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19009	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0190	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA19009	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0326	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19009	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19009	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA19009	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19009	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19009	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA19009	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0157	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19009	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0234	JPT	EAS	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA19009	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0189	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19009	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0323	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19009	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0112	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19009	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0040	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19009	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0074	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19009	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0054	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	NA19009	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0061	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19009	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0037	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	NA19009	hp1	a0013	a0013c0013	a0013c0013t0003	a0013c0013t0003g0207	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19009	hp2	a0006	a0006c0004	a0006c0004t0010	a0006c0004t0010g0252	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19009	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0107	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA19009	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0283	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19009	hp2	a0001	a0001c0013	a0001c0013t0001	a0001c0013t0001g0171	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19009	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0253	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19009	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0055	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA9_chr17_68969488_69065927	NA19009	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0256	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19009	hp2	a0015	a0015c0030	a0015c0030t0002	a0015c0030t0002g0205	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA19009	hp1	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0115	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19009	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0260	JPT	EAS	ABCB11	chr2	168915781	169036324