Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19012	hp1	a0001	a0001c0001	a0001c0001t0046	a0001c0001t0046g0124	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19012	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0178	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19012	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0339	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19012	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0246	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0158	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19012	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19012	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19012	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19012	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0014	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19012	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0138	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0306	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA19012	hp1	a0008	a0008c0016	a0008c0016t0001	a0008c0016t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19012	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0005	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19012	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19012	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19012	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0146	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19012	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0124	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19012	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0010	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19012	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19012	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0021	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19012	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0009	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19012	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0123	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA12_chr2_214926542_215143626	NA19012	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0038	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA19012	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0030	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA2_chr9_137002234_137033237	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA19012	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0262	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19012	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0121	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA9_chr17_68969488_69065927	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19012	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0131	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB5_chr7_20610667_20762008	NA19012	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0223	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19012	hp2	a0002	a0002c0014	a0002c0014t0001	a0002c0014t0001g0234	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA19012	hp1	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0038	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA19012	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19012	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC10_chr6_43422541_43455427	NA19012	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19012	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC2_chr10_99777640_99857594	NA19012	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0084	JPT	EAS	ABCC2	chr10	99777640	99857594