Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0265	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19056	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0008	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19056	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0040	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19056	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0137	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19056	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19056	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0060	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19056	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0004	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19056	hp1	a0002	a0002c0002	a0002c0002t0042	a0002c0002t0042g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19056	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19056	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19056	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	NA19056	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0025	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19056	hp2	a0002	a0002c0005	a0002c0005t0009	a0002c0005t0009g0163	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19056	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0052	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19056	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19056	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0025	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19056	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	NA19056	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0301	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19056	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0232	JPT	EAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	NA19056	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0239	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19056	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0223	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19056	hp2	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0272	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA19056	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0093	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19056	hp2	a0002	a0002c0002	a0002c0002t0009	a0002c0002t0009g0193	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19056	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0277	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19056	hp2	a0009	a0009c0018	a0009c0018t0001	a0009c0018t0001g0102	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA19056	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0228	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19056	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0038	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19056	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0255	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19056	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0116	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA8_chr17_68862289_68960392	NA19056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19056	hp2	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0257	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA19056	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0080	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0221	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB1_chr7_87498017_87605884	NA19056	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0253	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19056	hp2	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0047	JPT	EAS	ABCB1	chr7	87498017	87605884