Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19058	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0008	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA19058	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0186	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19058	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0170	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19058	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0014	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19058	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0197	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	AAAS	chr12	53302460	53326610
AADAT_chr4_170055222_170094956	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19058	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0224	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19058	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0251	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19058	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0139	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19058	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0228	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0212	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19058	hp1	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0027	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19058	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARS1_chr16_70247298_70294506	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19058	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0233	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19058	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19058	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0032	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19058	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0177	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19058	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0242	JPT	EAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	NA19058	hp1	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0279	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0076	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA3_chr16_2270881_2345728	NA19058	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0131	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19058	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0027	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA19058	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0319	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19058	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0225	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA9_chr17_68969488_69065927	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19058	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0006	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA19058	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0085	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB4_chr7_87396696_87480680	NA19058	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0051	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19058	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19058	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0157	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC8_chr11_17387885_17481845	NA19058	hp1	a0001	a0001c0013	a0001c0013t0001	a0001c0013t0001g0064	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA19058	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD4_chr14_74280269_74307934	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA19058	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF2_chr7_151206484_151232205	NA19058	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	JPT	EAS	ABCF2	chr7	151206484	151232205