Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A4GALT_chr22_42687121_42725870	NA19062	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0195	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19062	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0306	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19062	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19062	hp1	a0004	a0004c0004	a0004c0004t0019	a0004c0004t0019g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19062	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0052	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19062	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19062	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0187	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19062	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0202	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19062	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0027	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19062	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0151	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19062	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0056	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19062	hp1	a0007	a0007c0009	a0007c0009t0001	a0007c0009t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19062	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0214	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0132	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19062	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA19062	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0230	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19062	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0311	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA19062	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0091	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19062	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0291	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA19062	hp1	a0044	a0044c0058	a0044c0058t0001	a0044c0058t0001g0101	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19062	hp2	a0010	a0010c0031	a0010c0031t0003	a0010c0031t0003g0118	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA5_chr17_69239311_69332133	NA19062	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0213	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19062	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0064	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19062	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0173	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB1_chr7_87498017_87605884	NA19062	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0020	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB5_chr7_20610667_20762008	NA19062	hp1	a0009	a0009c0020	a0009c0020t0001	a0009c0020t0001g0176	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19062	hp2	a0003	a0003c0002	a0003c0002t0015	a0003c0002t0015g0318	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19062	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA19062	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0171	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19062	hp2	a0007	a0007c0016	a0007c0016t0001	a0007c0016t0001g0079	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC5_chr3_183914934_184022884	NA19062	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0087	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA19062	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0182	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC8_chr11_17387885_17481845	NA19062	hp1	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0126	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA19062	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0226	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD1_chrX_153719856_153749755	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	NA19062	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19062	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0047	JPT	EAS	ABCD2	chr12	39545033	39624803