Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19064	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA19064	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0029	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0287	JPT	EAS	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	NA19064	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19064	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0236	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19064	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19064	hp2	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0130	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19064	hp2	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19064	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19064	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AAMDC_chr11_77816144_77877352	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0334	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0124	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	AAR2	chr20	36231478	36261933
AARS2_chr6_44293731_44318347	NA19064	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	NA19064	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0228	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19064	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0022	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19064	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0284	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19064	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0007	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA19064	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0092	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA19064	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0123	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19064	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0147	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA3_chr16_2270881_2345728	NA19064	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0017	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA19064	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0130	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19064	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0245	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19064	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0254	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB11_chr2_168915781_169036324	NA19064	hp1	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0289	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0253	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB4_chr7_87396696_87480680	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0182	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19064	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0067	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19064	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB8_chr7_151023450_151052782	NA19064	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0115	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA19064	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0204	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0158	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC3_chr17_50629881_50697253	NA19064	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19064	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0248	JPT	EAS	ABCC3	chr17	50629881	50697253