Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19076	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0218	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19076	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0151	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A2M	chr12	9062708	9120919
A4GNT_chr3_138118713_138137390	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19076	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0050	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19076	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0036	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19076	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0026	JPT	EAS	AADACL2	chr3	151728927	151766339
AARS2_chr6_44293731_44318347	NA19076	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19076	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA19076	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0020	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19076	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0175	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19076	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0304	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19076	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0080	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA5_chr17_69239311_69332133	NA19076	hp1	a0013	a0013c0019	a0013c0019t0002	a0013c0019t0002g0252	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19076	hp2	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0109	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCB4_chr7_87396696_87480680	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0219	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB7_chrX_75046048_75161283	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCD1_chrX_153719856_153749755	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19076	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0242	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA19076	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0315	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19076	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0148	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCF1_chr6_30566442_30596522	NA19076	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0070	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA19076	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0097	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	NA19076	hp1	a0001	a0001c0001	a0001c0001t0027	a0001c0001t0027g0040	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA19076	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0002	JPT	EAS	ABCF2	chr7	151206484	151232205
ABHD17A_chr19_1871810_1890496	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD4_chr14_22593300_22617963	NA19076	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	JPT	EAS	ABHD4	chr14	22593300	22617963
ABHD5_chr3_43685938_43727725	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	ABHD5	chr3	43685938	43727725
ABHD5_chr3_43685938_43727725	NA19076	hp2	a0001	a0001c0001	a0001c0001t0021	a0001c0001t0021g0011	JPT	EAS	ABHD5	chr3	43685938	43727725
ABHD8_chr19_17287131_17308425	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	JPT	EAS	ABHD8	chr19	17287131	17308425
ABHD8_chr19_17287131_17308425	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	ABHD8	chr19	17287131	17308425
ABITRAM_chr9_108929400_108945954	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABITRAM_chr9_108929400_108945954	NA19076	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABRA_chr8_106754483_106775244	NA19076	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0006	JPT	EAS	ABRA	chr8	106754483	106775244
ABRA_chr8_106754483_106775244	NA19076	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0003	JPT	EAS	ABRA	chr8	106754483	106775244
ABT1_chr6_26591953_26605739	NA19076	hp1	a0004	a0004c0009	a0004c0009t0001	a0004c0009t0001g0001	JPT	EAS	ABT1	chr6	26591953	26605739
ABT1_chr6_26591953_26605739	NA19076	hp2	a0003	a0003c0008	a0003c0008t0001	a0003c0008t0001g0001	JPT	EAS	ABT1	chr6	26591953	26605739
ABTB1_chr3_127667952_127685926	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABTB1	chr3	127667952	127685926
ABTB1_chr3_127667952_127685926	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	JPT	EAS	ABTB1	chr3	127667952	127685926
ACACA_chr17_37079992_37411836	NA19076	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0257	JPT	EAS	ACACA	chr17	37079992	37411836
ACACA_chr17_37079992_37411836	NA19076	hp2	a0001	a0001c0001	a0001c0001t0016	a0001c0001t0016g0235	JPT	EAS	ACACA	chr17	37079992	37411836
ACAD11_chr3_132553141_132664809	NA19076	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0106	JPT	EAS	ACAD11	chr3	132553141	132664809
ACAD11_chr3_132553141_132664809	NA19076	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0214	JPT	EAS	ACAD11	chr3	132553141	132664809