Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19083	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0073	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA19083	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0264	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19083	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0217	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19083	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0195	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19083	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0054	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA19083	hp1	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0080	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19083	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA19083	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19083	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0111	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19083	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0203	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19083	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0025	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19083	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19083	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19083	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19083	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19083	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0028	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19083	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0250	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0280	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19083	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0067	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19083	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0300	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19083	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0228	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA19083	hp1	a0006	a0006c0023	a0006c0023t0003	a0006c0023t0003g0138	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA19083	hp2	a0017	a0017c0097	a0017c0097t0001	a0017c0097t0001g0084	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA19083	hp1	a0009	a0009c0028	a0009c0028t0048	a0009c0028t0048g0241	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19083	hp2	a0010	a0010c0030	a0010c0030t0022	a0010c0030t0022g0191	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	NA19083	hp1	a0014	a0014c0030	a0014c0030t0001	a0014c0030t0001g0068	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA19083	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0072	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19083	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0178	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	NA19083	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0210	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19083	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0087	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19083	hp2	a0001	a0001c0035	a0001c0035t0001	a0001c0035t0001g0067	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA19083	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19083	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0184	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA19083	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0069	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA19083	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	JPT	EAS	ABCB11	chr2	168915781	169036324