JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	HG02074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0170	KHV	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02074	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0061	KHV	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0230	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0018	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02074	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02074	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0122	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02074	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0134	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0066	KHV	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0109	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02074	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02074	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0101	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	KHV	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	KHV	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02074	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0111	KHV	EAS	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	HG02074	hp1	a0009	a0009c0025	a0009c0025t0003	a0009c0025t0003g0260	KHV	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02074	hp2	a0001	a0001c0003	a0001c0003t0106	a0001c0003t0106g0141	KHV	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02074	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0219	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG02074	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	KHV	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02074	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	KHV	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	KHV	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	KHV	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02074	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AASDHPPT	chr11	106072662	106103695
ABAT_chr16_8669617_8789570	HG02074	hp1	a0002	a0002c0006	a0002c0006t0002	a0002c0006t0002g0210	KHV	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02074	hp2	a0001	a0001c0021	a0001c0021t0001	a0001c0021t0001g0111	KHV	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02074	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0063	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02074	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0290	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02074	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02074	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0161	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA4_chr1_93987834_94126148	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0247	KHV	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG02074	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	KHV	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	HG02074	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0128	KHV	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02074	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0218	KHV	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	KHV	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG02074	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0199	KHV	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	HG02074	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	KHV	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	HG02074	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0139	KHV	EAS	ABCA9	chr17	68969488	69065927