Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01516	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	IBS	EUR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	IBS	EUR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01516	hp2	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0274	IBS	EUR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01516	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0107	IBS	EUR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01516	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0079	IBS	EUR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG01516	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0164	IBS	EUR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01516	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0225	IBS	EUR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01516	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0088	IBS	EUR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01516	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0356	IBS	EUR	A4GALT	chr22	42687121	42725870
AADACL2_chr3_151728927_151766339	HG01516	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0042	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01516	hp2	a0001	a0001c0001	a0001c0001t0043	a0001c0001t0043g0011	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0113	IBS	EUR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01516	hp2	a0001	a0001c0012	a0001c0012t0008	a0001c0012t0008g0032	IBS	EUR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01516	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	IBS	EUR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	IBS	EUR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	IBS	EUR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG01516	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0087	IBS	EUR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01516	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0179	IBS	EUR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01516	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0247	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	IBS	EUR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	IBS	EUR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01516	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0005	IBS	EUR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01516	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0282	IBS	EUR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01516	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0179	IBS	EUR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01516	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	IBS	EUR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01516	hp2	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0019	IBS	EUR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG01516	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	IBS	EUR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	IBS	EUR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01516	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0301	IBS	EUR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	IBS	EUR	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG01516	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	IBS	EUR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0143	IBS	EUR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01516	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0096	IBS	EUR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01516	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0218	IBS	EUR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01516	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0088	IBS	EUR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01516	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0205	IBS	EUR	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	HG01516	hp1	a0012	a0012c0045	a0012c0045t0002	a0012c0045t0002g0075	IBS	EUR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01516	hp2	a0008	a0008c0032	a0008c0032t0001	a0008c0032t0001g0079	IBS	EUR	ABCA13	chr7	48166458	48652497
ABCA2_chr9_137002234_137033237	HG01516	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0007	IBS	EUR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01516	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0123	IBS	EUR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG01516	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	IBS	EUR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG01516	hp2	a0002	a0002c0010	a0002c0010t0001	a0002c0010t0001g0155	IBS	EUR	ABCA3	chr16	2270881	2345728