Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03239	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0038	PJL	SAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03239	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0096	PJL	SAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG03239	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0044	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03239	hp2	a0003	a0003c0071	a0003c0071t0003	a0003c0071t0003g0232	PJL	SAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG03239	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0003	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03239	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03239	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0256	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03239	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0057	PJL	SAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	PJL	SAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03239	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0135	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03239	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0014	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03239	hp2	a0005	a0005c0014	a0005c0014t0006	a0005c0014t0006g0014	PJL	SAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03239	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0059	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03239	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PJL	SAS	AADAC	chr3	151809116	151833488
AAMDC_chr11_77816144_77877352	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0205	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03239	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	PJL	SAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03239	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0311	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03239	hp2	a0009	a0009c0017	a0009c0017t0001	a0009c0017t0001g0026	PJL	SAS	AARS1	chr16	70247298	70294506
AASDH_chr4_56333290_56392491	HG03239	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0278	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03239	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	PJL	SAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03239	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0297	PJL	SAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	PJL	SAS	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG03239	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0144	PJL	SAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	PJL	SAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG03239	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03239	hp2	a0004	a0004c0005	a0004c0005t0005	a0004c0005t0005g0024	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03239	hp1	a0002	a0002c0016	a0002c0016t0003	a0002c0016t0003g0235	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03239	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0126	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03239	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0183	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03239	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0246	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	HG03239	hp1	a0009	a0009c0027	a0009c0027t0006	a0009c0027t0006g0267	PJL	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03239	hp2	a0008	a0008c0006	a0008c0006t0047	a0008c0006t0047g0056	PJL	SAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG03239	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PJL	SAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG03239	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	PJL	SAS	ABCA2	chr9	137002234	137033237