Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	HG03490	hp1	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0061	PJL	SAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03490	hp2	a0003	a0003c0010	a0003c0010t0003	a0003c0010t0003g0085	PJL	SAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03490	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0205	PJL	SAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03490	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0003	PJL	SAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03490	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0018	PJL	SAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03490	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	PJL	SAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	PJL	SAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03490	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	PJL	SAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG03490	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PJL	SAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	PJL	SAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03490	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0041	PJL	SAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	PJL	SAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03490	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	PJL	SAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03490	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PJL	SAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03490	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PJL	SAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03490	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0010	PJL	SAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PJL	SAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03490	hp2	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0048	PJL	SAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG03490	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0264	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	PJL	SAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PJL	SAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03490	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PJL	SAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03490	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0268	PJL	SAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	PJL	SAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	PJL	SAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PJL	SAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03490	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	PJL	SAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03490	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0279	PJL	SAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03490	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0148	PJL	SAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG03490	hp1	a0004	a0004c0029	a0004c0029t0001	a0004c0029t0001g0021	PJL	SAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG03490	hp2	a0003	a0003c0044	a0003c0044t0002	a0003c0044t0002g0252	PJL	SAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG03490	hp1	a0002	a0002c0005	a0002c0005t0008	a0002c0005t0008g0017	PJL	SAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG03490	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0322	PJL	SAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG03490	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0294	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG03490	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0005	PJL	SAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG03490	hp1	a0010	a0010c0055	a0010c0055t0010	a0010c0055t0010g0184	PJL	SAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG03490	hp2	a0001	a0001c0011	a0001c0011t0005	a0001c0011t0005g0088	PJL	SAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG03490	hp1	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0295	PJL	SAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG03490	hp2	a0007	a0007c0003	a0007c0003t0004	a0007c0003t0004g0048	PJL	SAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PJL	SAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG03490	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	PJL	SAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	HG03490	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0256	PJL	SAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG03490	hp2	a0018	a0018c0025	a0018c0025t0001	a0018c0025t0001g0002	PJL	SAS	ABCA4	chr1	93987834	94126148