Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view OR6C2 226 85 28 17 0 0 0.876 0.329 0.109 0.066 0.000 0.000 chr12 55439076 55458347
view OR6C3 224 81 30 22 2 2 0.868 0.314 0.116 0.085 0.008 0.008 chr12 55325746 55337636
view OR6C4 210 71 45 31 1 1 0.814 0.275 0.174 0.120 0.004 0.004 chr12 55544602 55560832
view OR6C65 215 78 43 27 0 0 0.833 0.302 0.167 0.105 0.000 0.000 chr12 55395529 55406467
view OR6C68 236 85 21 19 0 0 0.915 0.329 0.081 0.074 0.000 0.000 chr12 55487378 55498316
view OR6C6 240 94 18 11 0 0 0.930 0.364 0.070 0.043 0.000 0.000 chr12 55288988 55301569
view OR6C70 220 82 37 23 1 0 0.853 0.318 0.143 0.089 0.004 0.000 chr12 55464200 55475138
view OR6C74 169 51 86 52 0 0 0.655 0.198 0.333 0.202 0.000 0.000 chr12 55239609 55261625
view OR6C75 226 85 32 20 0 0 0.876 0.329 0.124 0.078 0.000 0.000 chr12 55357975 55374279
view OR6C76 219 80 38 24 0 0 0.849 0.310 0.147 0.093 0.000 0.000 chr12 55421254 55432192
view OR6F1 186 67 69 36 1 0 0.721 0.260 0.267 0.140 0.004 0.000 chr1 247706436 247721646
view OR6J1 180 46 62 43 0 0 0.698 0.178 0.240 0.167 0.000 0.000 chr14 22625929 22649352
view OR6K2 230 84 25 18 0 0 0.891 0.326 0.097 0.070 0.000 0.000 chr1 158694678 158705652
view OR6K3 219 83 39 22 0 0 0.849 0.322 0.151 0.085 0.000 0.000 chr1 158711327 158725720
view OR6K6 233 87 20 14 2 1 0.903 0.337 0.078 0.054 0.008 0.004 chr1 158749720 158760891
view OR6M1 235 91 20 13 2 0 0.911 0.353 0.078 0.050 0.008 0.000 chr11 123800408 123811349
view OR6N1 235 93 23 12 0 0 0.911 0.360 0.089 0.047 0.000 0.000 chr1 158759236 158777195
view OR6N2 228 83 30 22 0 0 0.884 0.322 0.116 0.085 0.000 0.000 chr1 158769222 158786204
view OR6P1 212 79 45 26 1 0 0.822 0.306 0.174 0.101 0.004 0.000 chr1 158555606 158575580
view OR6Q1 207 79 46 25 1 0 0.802 0.306 0.178 0.097 0.004 0.000 chr11 58025953 58036906
view OR6S1 234 88 21 15 2 1 0.907 0.341 0.081 0.058 0.008 0.004 chr14 20635696 20646691
view OR6T1 220 85 37 20 1 0 0.853 0.329 0.143 0.078 0.004 0.000 chr11 123937867 123948838
view OR6V1 183 51 74 54 0 0 0.709 0.198 0.287 0.209 0.000 0.000 chr7 143047341 143058282
view OR6X1 218 79 39 25 0 0 0.845 0.306 0.151 0.097 0.000 0.000 chr11 123748580 123759518
view OR6Y1 214 78 42 25 0 0 0.829 0.302 0.163 0.097 0.000 0.000 chr1 158539550 158559405
view OR7A10 243 98 14 6 0 0 0.942 0.380 0.054 0.023 0.000 0.000 chr19 14835466 14853922
view OR7A17 221 83 35 20 1 1 0.857 0.322 0.136 0.078 0.004 0.004 chr19 14873203 14891132
view OR7A5 235 87 17 13 0 0 0.911 0.337 0.066 0.050 0.000 0.000 chr19 14821241 14840185
view OR7C1 203 68 37 24 0 0 0.787 0.264 0.143 0.093 0.000 0.000 chr19 14793515 14840185
view OR7C2 217 79 36 21 0 0 0.841 0.306 0.140 0.081 0.000 0.000 chr19 14936489 14947448
view OR7D2 198 61 53 37 0 0 0.767 0.236 0.205 0.143 0.000 0.000 chr19 9173979 9193818
view OR7D4 215 79 39 22 1 1 0.833 0.306 0.151 0.085 0.004 0.004 chr19 9205276 9224589
view OR7E24 237 88 19 15 1 1 0.919 0.341 0.074 0.058 0.004 0.004 chr19 9245930 9257625
view OR7G1 204 69 50 33 1 0 0.791 0.267 0.194 0.128 0.004 0.000 chr19 9109828 9120763
view OR7G2 221 77 31 22 0 0 0.857 0.298 0.120 0.085 0.000 0.000 chr19 9095407 9112475
view OR7G3 200 61 49 37 1 0 0.775 0.236 0.190 0.143 0.004 0.000 chr19 9121012 9131950
view OR8A1 225 86 31 18 1 1 0.872 0.333 0.120 0.070 0.004 0.004 chr11 124564997 124576374
view OR8B12 227 82 30 23 1 0 0.880 0.318 0.116 0.089 0.004 0.000 chr11 124537722 124548654
view OR8B2 221 86 34 17 1 1 0.857 0.333 0.132 0.066 0.004 0.004 chr11 124377394 124389499
view OR8B3 225 87 29 15 0 0 0.872 0.337 0.112 0.058 0.000 0.000 chr11 124390534 124404024
view OR8B4 212 80 43 24 2 0 0.822 0.310 0.167 0.093 0.008 0.000 chr11 124418942 124429871
view OR8B8 210 69 47 35 0 0 0.814 0.267 0.182 0.136 0.000 0.000 chr11 124432445 124450696
view OR8D1 213 78 43 26 0 0 0.826 0.302 0.167 0.101 0.000 0.000 chr11 124297831 124318949
view OR8D2 212 79 44 25 0 0 0.822 0.306 0.171 0.097 0.000 0.000 chr11 124314262 124325197
view OR8D4 224 88 32 17 2 0 0.868 0.341 0.124 0.066 0.008 0.000 chr11 123897167 123914229
view OR8G1 214 82 38 20 1 1 0.829 0.318 0.147 0.078 0.004 0.004 chr11 124236095 124259364
view OR8G5 215 84 42 20 0 0 0.833 0.326 0.163 0.078 0.000 0.000 chr11 124251376 124271224
view OR8H1 227 89 28 13 0 0 0.880 0.345 0.109 0.050 0.000 0.000 chr11 56283462 56297254
view OR8H2 225 92 32 13 1 0 0.872 0.357 0.124 0.050 0.004 0.000 chr11 56098687 56112658
view OR8H3 207 77 49 26 1 1 0.802 0.298 0.190 0.101 0.004 0.004 chr11 56117373 56128311