Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view OXR1 85 20 88 51 0 0 0.329 0.078 0.341 0.198 0.000 0.000 chr8 106265190 106757694
view OXSM 190 60 65 43 1 0 0.736 0.233 0.252 0.167 0.004 0.000 chr3 25785090 25799531
view OXSR1 123 33 95 55 0 0 0.477 0.128 0.368 0.213 0.000 0.000 chr3 38160537 38260484
view OXTR 236 90 18 11 0 0 0.915 0.349 0.070 0.043 0.000 0.000 chr3 8745381 8774613
view OXT 230 84 27 21 0 0 0.891 0.326 0.105 0.081 0.000 0.000 chr20 3066620 3077517
view P2RX1 188 49 55 45 0 0 0.729 0.190 0.213 0.174 0.000 0.000 chr17 3891592 3921465
view P2RX2 192 56 63 46 0 0 0.744 0.217 0.244 0.178 0.000 0.000 chr12 132613776 132627388
view P2RX3 176 53 62 39 0 0 0.682 0.205 0.240 0.151 0.000 0.000 chr11 57333352 57377396
view P2RX4 193 58 53 37 0 0 0.748 0.225 0.205 0.143 0.000 0.000 chr12 121205129 121239106
view P2RX5 180 48 61 40 0 0 0.698 0.186 0.236 0.155 0.000 0.000 chr17 3668227 3701155
view P2RX6 229 82 28 22 0 0 0.888 0.318 0.109 0.085 0.000 0.000 chr22 21010165 21033008
view P2RX7 182 58 51 31 0 0 0.705 0.225 0.198 0.120 0.000 0.000 chr12 121127876 121193032
view P2RY10 99 34 152 65 0 0 0.384 0.132 0.589 0.252 0.000 0.000 chrX 78940391 78968727
view P2RY11 225 76 31 27 0 0 0.872 0.295 0.120 0.105 0.000 0.000 chr19 10106693 10120372
view P2RY12 197 73 45 23 0 0 0.764 0.283 0.174 0.089 0.000 0.000 chr3 151331843 151389753
view P2RY13 220 88 38 17 0 0 0.853 0.341 0.147 0.066 0.000 0.000 chr3 151321312 151334549
view P2RY14 201 72 47 24 0 0 0.779 0.279 0.182 0.093 0.000 0.000 chr3 151207117 151283542
view P2RY1 183 55 74 50 0 0 0.709 0.213 0.287 0.194 0.000 0.000 chr3 152830131 152846439
view P2RY2 207 60 41 35 0 0 0.802 0.233 0.159 0.136 0.000 0.000 chr11 73213281 73247427
view P2RY4 98 31 157 72 2 1 0.380 0.120 0.609 0.279 0.008 0.004 chrX 70253166 70265204
view P2RY6 161 42 80 50 0 0 0.624 0.163 0.310 0.194 0.000 0.000 chr11 73267338 73303625
view P2RY8 69 9 98 40 0 0 0.267 0.035 0.380 0.155 0.000 0.000 chrX 1457581 1542185
view P3H1 202 68 51 34 0 0 0.783 0.264 0.198 0.132 0.000 0.000 chr1 42741374 42772028
view P3H2 151 43 63 35 0 0 0.585 0.167 0.244 0.136 0.000 0.000 chr3 189951728 190125897
view P3H3 225 84 27 15 1 1 0.872 0.326 0.105 0.058 0.004 0.004 chr12 6823407 6844847
view P3H4 201 65 50 35 0 0 0.779 0.252 0.194 0.136 0.000 0.000 chr17 41796953 41816949
view P3R3URF 210 67 44 34 0 0 0.814 0.260 0.171 0.132 0.000 0.000 chr1 46170486 46181488
view P4HA1 116 38 117 52 0 0 0.450 0.147 0.453 0.202 0.000 0.000 chr10 73002217 73101866
view P4HA2 212 77 40 24 0 0 0.822 0.298 0.155 0.093 0.000 0.000 chr5 132185147 132232853
view P4HA3 198 68 51 30 0 0 0.767 0.264 0.198 0.116 0.000 0.000 chr11 74261657 74316640
view P4HB 186 57 65 44 0 0 0.721 0.221 0.252 0.171 0.000 0.000 chr17 81838166 81865535
view P4HTM 110 22 143 82 0 0 0.426 0.085 0.554 0.318 0.000 0.000 chr3 48985241 49012153
view PA2G4 175 45 76 54 0 0 0.678 0.174 0.295 0.209 0.000 0.000 chr12 56099559 56118910
view PAAF1 184 64 61 34 1 1 0.713 0.248 0.236 0.132 0.004 0.004 chr11 73871999 73936114
view PABIR1 217 83 41 22 0 0 0.841 0.322 0.159 0.085 0.000 0.000 chr9 68775065 68790566
view PABIR2 42 6 206 94 0 0 0.163 0.023 0.798 0.364 0.000 0.000 chrX 134764566 134802205
view PABIR3 35 4 197 84 0 0 0.136 0.016 0.764 0.326 0.000 0.000 chrX 134802237 134859832
view PABPC1L2A 74 17 175 83 0 0 0.287 0.066 0.678 0.322 0.000 0.000 chrX 73072276 73084512
view PABPC1L2B 83 20 170 82 1 0 0.322 0.078 0.659 0.318 0.004 0.000 chrX 72997939 73011106
view PABPC1L 197 60 56 41 0 0 0.764 0.233 0.217 0.159 0.000 0.000 chr20 44905060 44944316
view PABPC1 207 81 44 18 0 0 0.802 0.314 0.171 0.070 0.000 0.000 chr8 100697916 100727088
view PABPC3 228 85 29 19 1 1 0.884 0.329 0.112 0.074 0.004 0.004 chr13 25091136 25104254
view PABPC4L 181 50 73 52 1 0 0.702 0.194 0.283 0.202 0.004 0.000 chr4 134191333 134206789
view PABPC4 186 63 67 38 0 0 0.721 0.244 0.260 0.147 0.000 0.000 chr1 39555816 39581790
view PABPC5 104 37 150 66 2 0 0.403 0.143 0.581 0.256 0.008 0.000 chrX 91429839 91443584
view PABPN1L 225 76 29 25 0 0 0.872 0.295 0.112 0.097 0.000 0.000 chr16 88858333 88871660
view PABPN1 213 73 40 28 0 0 0.826 0.283 0.155 0.109 0.000 0.000 chr14 23316457 23331163
view PACC1 186 64 61 36 0 0 0.721 0.248 0.236 0.140 0.000 0.000 chr1 212358928 212419886
view PACRGL 205 71 49 30 0 0 0.795 0.275 0.190 0.116 0.000 0.000 chr4 20695458 20737557
view PACRG 65 10 77 44 0 0 0.252 0.039 0.298 0.171 0.000 0.000 chr6 162722974 163320500