Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PARVG 210 69 37 27 0 0 0.814 0.267 0.143 0.105 0.000 0.000 chr22 44175925 44213469
view PASD1 49 2 176 81 0 0 0.190 0.008 0.682 0.314 0.000 0.000 chrX 151558675 151681739
view PASK 187 63 57 35 0 0 0.725 0.244 0.221 0.136 0.000 0.000 chr2 241101099 241154472
view PATE1 216 88 41 17 1 0 0.837 0.341 0.159 0.066 0.004 0.000 chr11 125741279 125754867
view PATE2 207 80 49 23 1 1 0.802 0.310 0.190 0.089 0.004 0.004 chr11 125771113 125783828
view PATE3 213 84 41 20 2 0 0.826 0.326 0.159 0.078 0.008 0.000 chr11 125783127 125796600
view PATE4 211 77 44 25 0 0 0.818 0.298 0.171 0.097 0.000 0.000 chr11 125828316 125845072
view PATJ 78 5 103 66 0 0 0.302 0.019 0.399 0.256 0.000 0.000 chr1 61737480 62168915
view PATL1 137 44 102 46 0 0 0.531 0.171 0.395 0.178 0.000 0.000 chr11 59631716 59674037
view PATL2 130 36 98 54 0 0 0.504 0.140 0.380 0.209 0.000 0.000 chr15 44660732 44716323
view PATZ1 192 72 58 28 0 0 0.744 0.279 0.225 0.109 0.000 0.000 chr22 31320804 31351346
view PAWR 127 46 103 47 0 0 0.492 0.178 0.399 0.182 0.000 0.000 chr12 79579879 79695964
view PAX1 199 63 47 31 0 0 0.771 0.244 0.182 0.120 0.000 0.000 chr20 21700664 21723481
view PAX2 115 13 107 71 0 0 0.446 0.050 0.415 0.275 0.000 0.000 chr10 100740582 100834944
view PAX3 163 48 68 44 0 0 0.632 0.186 0.264 0.171 0.000 0.000 chr2 222194887 222303998
view PAX4 213 75 44 30 1 0 0.826 0.291 0.171 0.116 0.004 0.000 chr7 127605292 127623142
view PAX5 136 29 78 50 0 0 0.527 0.112 0.302 0.194 0.000 0.000 chr9 36828269 37039268
view PAX6 187 61 58 37 0 0 0.725 0.236 0.225 0.143 0.000 0.000 chr11 31784026 31816322
view PAX7 150 33 75 52 0 0 0.581 0.128 0.291 0.202 0.000 0.000 chr1 18625846 18753866
view PAX8 149 46 89 48 0 0 0.578 0.178 0.345 0.186 0.000 0.000 chr2 113210997 113283921
view PAX9 222 85 31 15 0 0 0.860 0.329 0.120 0.058 0.000 0.000 chr14 36656860 36684362
view PAXBP1 179 65 73 37 0 0 0.694 0.252 0.283 0.143 0.000 0.000 chr21 32728899 32776755
view PAXIP1 180 66 66 35 0 0 0.698 0.256 0.256 0.136 0.000 0.000 chr7 154938690 155008124
view PAXX 191 57 61 42 0 0 0.740 0.221 0.236 0.163 0.000 0.000 chr9 136987422 136998976
view PBDC1 84 23 168 77 1 1 0.326 0.089 0.651 0.298 0.004 0.004 chrX 76168062 76183314
view PBK 195 71 53 28 0 0 0.756 0.275 0.205 0.109 0.000 0.000 chr8 27804624 27842817
view PBLD 181 57 61 35 0 0 0.702 0.221 0.236 0.136 0.000 0.000 chr10 68277660 68337928
view PBOV1 191 69 64 34 1 1 0.740 0.267 0.248 0.132 0.004 0.004 chr6 138210986 138223491
view PBRM1 149 40 95 58 0 0 0.578 0.155 0.368 0.225 0.000 0.000 chr3 52540367 52690913
view PBX1 92 18 92 54 0 0 0.357 0.070 0.357 0.209 0.000 0.000 chr1 164554184 164856831
view PBX2 217 77 37 25 2 1 0.841 0.298 0.143 0.097 0.008 0.004 chr6 32179733 32195202
view PBX3 146 49 91 48 0 0 0.566 0.190 0.353 0.186 0.000 0.000 chr9 125742373 125972377
view PBX4 187 62 53 32 0 0 0.725 0.240 0.205 0.124 0.000 0.000 chr19 19556713 19623687
view PBXIP1 143 30 110 71 0 0 0.554 0.116 0.426 0.275 0.000 0.000 chr1 154939080 154961099
view PCARE 231 89 24 13 0 0 0.895 0.345 0.093 0.050 0.000 0.000 chr2 29056695 29079523
view PCBD1 223 76 32 27 1 1 0.864 0.295 0.124 0.105 0.004 0.004 chr10 70878510 70893565
view PCBD2 164 50 65 35 0 0 0.636 0.194 0.252 0.136 0.000 0.000 chr5 134900131 134967644
view PCBP1 201 64 54 41 2 0 0.779 0.248 0.209 0.159 0.008 0.000 chr2 70082477 70094203
view PCBP2 173 58 64 34 0 0 0.671 0.225 0.248 0.132 0.000 0.000 chr12 53447102 53486162
view PCBP3 145 34 82 52 0 0 0.562 0.132 0.318 0.202 0.000 0.000 chr21 45638725 45947450
view PCBP4 155 39 99 63 0 0 0.601 0.151 0.384 0.244 0.000 0.000 chr3 51952458 51972454
view PCCA 86 16 94 50 0 0 0.333 0.062 0.364 0.194 0.000 0.000 chr13 100084093 100535435
view PCCB 149 40 89 54 0 0 0.578 0.155 0.345 0.209 0.000 0.000 chr3 136245340 136335169
view PCDH10 190 67 57 28 0 0 0.736 0.260 0.221 0.109 0.000 0.000 chr4 133144294 133199700
view PCDH11X 19 2 170 68 0 0 0.074 0.008 0.659 0.264 0.000 0.000 chrX 91774375 92628230
view PCDH11Y 0 0 115 43 0 0 0.000 0.000 0.446 0.167 0.000 0.000 chrY 4995296 5747224
view PCDH12 205 66 47 33 0 0 0.795 0.256 0.182 0.128 0.000 0.000 chr5 141938581 141963202
view PCDH15 50 2 87 54 0 0 0.194 0.008 0.337 0.209 0.000 0.000 chr10 53797771 54806231
view PCDH15 46 2 92 54 0 0 0.178 0.008 0.357 0.209 0.000 0.000 chr10 53816099 54806231
view PCDH17 154 53 77 41 0 0 0.597 0.205 0.298 0.159 0.000 0.000 chr13 57626744 57734311