Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PANK1 182 47 57 46 0 0 0.705 0.182 0.221 0.178 0.000 0.000 chr10 89577988 89650242
view PANK2 210 76 39 24 0 0 0.814 0.295 0.151 0.093 0.000 0.000 chr20 3884387 3934887
view PANK3 207 71 42 28 0 0 0.802 0.275 0.163 0.109 0.000 0.000 chr5 168543495 168584368
view PANK4 199 68 50 30 0 0 0.771 0.264 0.194 0.116 0.000 0.000 chr1 2503537 2531596
view PANX1 203 74 49 26 0 0 0.787 0.287 0.190 0.101 0.000 0.000 chr11 94123841 94186968
view PANX2 219 74 33 25 0 0 0.849 0.287 0.128 0.097 0.000 0.000 chr22 50165731 50185295
view PANX3 209 66 37 28 0 0 0.810 0.256 0.143 0.109 0.000 0.000 chr11 124606428 124625356
view PAOX 172 37 70 56 0 0 0.667 0.143 0.271 0.217 0.000 0.000 chr10 133374262 133396694
view PAPLN 208 70 43 28 0 0 0.806 0.271 0.167 0.109 0.000 0.000 chr14 73232506 73279623
view PAPOLA 154 44 87 51 0 0 0.597 0.171 0.337 0.198 0.000 0.000 chr14 96497382 96572116
view PAPOLB 218 78 38 25 0 0 0.845 0.302 0.147 0.097 0.000 0.000 chr7 4852738 4867030
view PAPOLG 163 43 78 51 0 0 0.632 0.167 0.302 0.198 0.000 0.000 chr2 60751268 60807086
view PAPPA2 58 2 117 72 0 0 0.225 0.008 0.453 0.279 0.000 0.000 chr1 176458175 176850601
view PAPPA 116 28 72 41 0 0 0.450 0.109 0.279 0.159 0.000 0.000 chr9 116148791 116407321
view PAPSS1 137 43 93 51 0 0 0.531 0.167 0.360 0.198 0.000 0.000 chr4 107608666 107725234
view PAPSS2 185 69 40 17 0 0 0.717 0.267 0.155 0.066 0.000 0.000 chr10 87654878 87752705
view PAQR3 166 56 80 42 0 0 0.643 0.217 0.310 0.163 0.000 0.000 chr4 78906878 78944438
view PAQR4 205 67 51 36 0 0 0.795 0.260 0.198 0.140 0.000 0.000 chr16 2964348 2978484
view PAQR5 141 46 68 29 0 0 0.547 0.178 0.264 0.112 0.000 0.000 chr15 69293912 69412780
view PAQR6 200 63 54 39 1 0 0.775 0.244 0.209 0.151 0.004 0.000 chr1 156238320 156253056
view PAQR7 180 55 73 45 0 0 0.698 0.213 0.283 0.174 0.000 0.000 chr1 25856484 25880708
view PAQR8 194 65 55 33 0 0 0.752 0.252 0.213 0.128 0.000 0.000 chr6 52357151 52412777
view PAQR9 222 82 31 20 0 0 0.860 0.318 0.120 0.078 0.000 0.000 chr3 142949585 142968674
view PARD3B 27 0 135 70 0 0 0.105 0.000 0.523 0.271 0.000 0.000 chr2 204540475 205625162
view PARD3 49 2 118 63 0 0 0.190 0.008 0.457 0.244 0.000 0.000 chr10 34104561 34820296
view PARD6A 132 23 122 80 0 0 0.512 0.089 0.473 0.310 0.000 0.000 chr16 67655960 67667774
view PARD6B 181 54 63 40 0 0 0.702 0.209 0.244 0.155 0.000 0.000 chr20 50726580 50758741
view PARD6G 190 68 57 31 0 0 0.736 0.264 0.221 0.120 0.000 0.000 chr18 80152232 80252514
view PARG 145 45 87 49 0 0 0.562 0.174 0.337 0.190 0.000 0.000 chr10 49813279 49947027
view PARK7 184 59 62 36 1 1 0.713 0.229 0.240 0.140 0.004 0.004 chr1 7956711 7990505
view PARL 178 61 66 36 0 0 0.690 0.236 0.256 0.140 0.000 0.000 chr3 183824271 183889880
view PARM1 95 18 106 63 0 0 0.368 0.070 0.411 0.244 0.000 0.000 chr4 74928116 75055113
view PARN 84 14 114 63 0 0 0.326 0.054 0.442 0.244 0.000 0.000 chr16 14430701 14635260
view PARP10 189 51 61 47 0 0 0.733 0.198 0.236 0.182 0.000 0.000 chr8 143972158 143991460
view PARP11 207 77 43 24 0 0 0.802 0.298 0.167 0.093 0.000 0.000 chr12 3803861 3878399
view PARP12 179 52 69 46 0 0 0.694 0.202 0.267 0.178 0.000 0.000 chr7 140018749 140067951
view PARP14 182 58 62 40 0 0 0.705 0.225 0.240 0.155 0.000 0.000 chr3 122675839 122735840
view PARP15 177 49 56 39 0 0 0.686 0.190 0.217 0.151 0.000 0.000 chr3 122572650 122644047
view PARP16 157 48 83 47 0 0 0.609 0.186 0.322 0.182 0.000 0.000 chr15 65253099 65291883
view PARP1 178 60 65 39 0 0 0.690 0.233 0.252 0.151 0.000 0.000 chr1 226355691 226413093
view PARP2 209 75 44 25 0 0 0.810 0.291 0.171 0.097 0.000 0.000 chr14 20338635 20362904
view PARP3 189 67 67 36 0 0 0.733 0.260 0.260 0.140 0.000 0.000 chr3 51937363 51953867
view PARP4 180 56 54 35 0 0 0.698 0.217 0.209 0.136 0.000 0.000 chr13 24415931 24517778
view PARP6 197 73 58 30 0 0 0.764 0.283 0.225 0.116 0.000 0.000 chr15 72236181 72277554
view PARP8 163 50 71 41 0 0 0.632 0.194 0.275 0.159 0.000 0.000 chr5 50661637 50851519
view PARP9 217 78 38 26 0 0 0.841 0.302 0.147 0.101 0.000 0.000 chr3 122522924 122569300
view PARPBP 171 61 72 40 0 0 0.663 0.236 0.279 0.155 0.000 0.000 chr12 102115183 102202520
view PARS2 205 75 49 27 2 1 0.795 0.291 0.190 0.105 0.008 0.004 chr1 54751898 54769523
view PARVA 142 35 64 41 0 0 0.550 0.136 0.248 0.159 0.000 0.000 chr11 12372571 12540356
view PARVB 165 40 52 40 0 0 0.640 0.155 0.202 0.155 0.000 0.000 chr22 44019302 44177939