Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view OR8I2 228 88 27 14 0 0 0.884 0.341 0.105 0.054 0.000 0.000 chr11 56088308 56099240
view OR8J1 209 79 46 25 3 1 0.810 0.306 0.178 0.097 0.012 0.004 chr11 56349291 56366511
view OR8J3 205 80 49 24 3 0 0.795 0.310 0.190 0.093 0.012 0.000 chr11 56129721 56145201
view OR8K1 218 85 36 19 2 0 0.845 0.329 0.140 0.074 0.008 0.000 chr11 56341039 56351998
view OR8K3 205 74 51 30 0 0 0.795 0.287 0.198 0.116 0.000 0.000 chr11 56310144 56325639
view OR8K5 217 81 39 22 1 1 0.841 0.314 0.151 0.085 0.004 0.004 chr11 56154394 56165317
view OR8S1 221 82 35 21 0 0 0.857 0.318 0.136 0.081 0.000 0.000 chr12 48520632 48531570
view OR8U1 181 63 73 39 0 0 0.702 0.244 0.283 0.151 0.000 0.000 chr11 56370624 56381553
view OR8U3 220 83 35 21 2 0 0.853 0.322 0.136 0.081 0.008 0.000 chr11 56412258 56423232
view OR9A2 160 41 94 60 0 0 0.620 0.159 0.364 0.233 0.000 0.000 chr7 143021200 143032132
view OR9A4 222 80 33 22 1 1 0.860 0.310 0.128 0.085 0.004 0.004 chr7 141911399 141925625
view OR9G1 206 77 47 25 0 0 0.798 0.298 0.182 0.097 0.000 0.000 chr11 56694095 56708884
view OR9G4 218 85 38 19 1 0 0.845 0.329 0.147 0.074 0.004 0.000 chr11 56736223 56753697
view OR9I1 204 74 52 30 1 0 0.791 0.287 0.202 0.116 0.004 0.000 chr11 58111742 58130530
view OR9K2 184 51 69 49 0 0 0.713 0.198 0.267 0.190 0.000 0.000 chr12 55121406 55137750
view OR9Q1 161 51 72 43 0 0 0.624 0.198 0.279 0.167 0.000 0.000 chr11 58018881 58186616
view OR9Q2 208 71 47 32 2 1 0.806 0.275 0.182 0.124 0.008 0.004 chr11 58184070 58199053
view ORAI2 201 59 49 39 0 0 0.779 0.229 0.190 0.151 0.000 0.000 chr7 102428575 102461825
view ORAI3 145 28 109 74 0 0 0.562 0.109 0.422 0.287 0.000 0.000 chr16 30944068 30959938
view ORC1 151 42 90 53 0 0 0.585 0.163 0.349 0.205 0.000 0.000 chr1 52367829 52409423
view ORC2 74 2 168 91 0 0 0.287 0.008 0.651 0.353 0.000 0.000 chr2 200903977 200968660
view ORC3 188 64 60 35 0 0 0.729 0.248 0.233 0.136 0.000 0.000 chr6 87585135 87672451
view ORC4 167 52 81 48 0 0 0.647 0.202 0.314 0.186 0.000 0.000 chr2 147925396 148025737
view ORC5 182 56 64 39 0 0 0.705 0.217 0.248 0.151 0.000 0.000 chr7 104121341 104213013
view ORC6 183 64 73 40 0 0 0.709 0.248 0.283 0.155 0.000 0.000 chr16 46684659 46703394
view ORM1 231 85 25 18 0 0 0.895 0.329 0.097 0.070 0.000 0.000 chr9 114318098 114331479
view ORM2 222 80 33 22 1 1 0.860 0.310 0.128 0.085 0.004 0.004 chr9 114324869 114338251
view ORMDL1 178 55 74 45 1 1 0.690 0.213 0.287 0.174 0.004 0.004 chr2 189765267 189789339
view ORMDL2 208 67 49 37 0 0 0.806 0.260 0.190 0.143 0.000 0.000 chr12 55813041 55826879
view ORMDL3 204 72 47 26 0 0 0.791 0.279 0.182 0.101 0.000 0.000 chr17 39916043 39932601
view OS9 175 47 75 52 0 0 0.678 0.182 0.291 0.202 0.000 0.000 chr12 57689132 57726557
view OSBP2 133 34 73 42 0 0 0.516 0.132 0.283 0.163 0.000 0.000 chr22 30689874 30912813
view OSBPL10 92 17 68 39 0 0 0.357 0.066 0.264 0.151 0.000 0.000 chr3 31655825 31986262
view OSBPL11 169 62 76 37 0 0 0.655 0.240 0.295 0.143 0.000 0.000 chr3 125523858 125600497
view OSBPL1A 102 13 88 60 0 0 0.395 0.050 0.341 0.233 0.000 0.000 chr18 24157052 24402824
view OSBPL2 173 49 63 40 0 0 0.671 0.190 0.244 0.155 0.000 0.000 chr20 62233521 62301183
view OSBPL3 162 47 57 37 0 0 0.628 0.182 0.221 0.143 0.000 0.000 chr7 24791540 24985178
view OSBPL5 162 35 58 40 0 0 0.628 0.136 0.225 0.155 0.000 0.000 chr11 3082107 3170310
view OSBPL6 99 14 102 67 0 0 0.384 0.054 0.395 0.260 0.000 0.000 chr2 178189512 178407893
view OSBPL7 200 61 54 41 0 0 0.775 0.236 0.209 0.159 0.000 0.000 chr17 47802372 47826794
view OSBPL8 118 21 103 59 0 0 0.457 0.081 0.399 0.229 0.000 0.000 chr12 76346797 76564771
view OSBPL9 92 19 139 75 0 0 0.357 0.074 0.539 0.291 0.000 0.000 chr1 51612092 51794219
view OSBP 159 47 74 39 0 0 0.616 0.182 0.287 0.151 0.000 0.000 chr11 59569398 59620774
view OSCAR 221 80 31 20 2 1 0.857 0.310 0.120 0.078 0.008 0.004 chr19 54089668 54105803
view OSCP1 189 67 62 34 0 0 0.733 0.260 0.240 0.132 0.000 0.000 chr1 36412906 36455451
view OSER1 221 81 32 20 0 0 0.857 0.314 0.124 0.078 0.000 0.000 chr20 44190939 44215771
view OSGEPL1 178 54 71 46 1 0 0.690 0.209 0.275 0.178 0.004 0.000 chr2 189741660 189767792
view OSGEP 229 90 27 13 2 2 0.888 0.349 0.105 0.050 0.008 0.008 chr14 20441401 20459812
view OSGIN1 174 40 65 48 0 0 0.674 0.155 0.252 0.186 0.000 0.000 chr16 83948240 83971332
view OSGIN2 209 77 44 25 0 0 0.810 0.298 0.171 0.097 0.000 0.000 chr8 89897570 89932888