Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PDGFC 103 33 89 48 0 0 0.399 0.128 0.345 0.186 0.000 0.000 chr4 156755454 156976799
view PDGFD 99 32 93 39 0 0 0.384 0.124 0.360 0.151 0.000 0.000 chr11 103902189 104169147
view PDGFRA 149 37 88 52 0 0 0.578 0.143 0.341 0.202 0.000 0.000 chr4 54224293 54303245
view PDGFRB 208 80 35 16 0 0 0.806 0.310 0.136 0.062 0.000 0.000 chr5 150108839 150160845
view PDGFRL 199 61 40 29 0 0 0.771 0.236 0.155 0.112 0.000 0.000 chr8 17572216 17648144
view PDHA1 57 8 192 93 0 0 0.221 0.031 0.744 0.360 0.000 0.000 chrX 19338927 19366718
view PDHA2 211 73 43 29 2 1 0.818 0.283 0.167 0.112 0.008 0.004 chr4 95835093 95846464
view PDHB 179 46 77 57 0 0 0.694 0.178 0.298 0.221 0.000 0.000 chr3 58422630 58438832
view PDHX 156 46 88 50 0 0 0.605 0.178 0.341 0.194 0.000 0.000 chr11 34911618 35001128
view PDIA2 217 69 37 32 0 0 0.841 0.267 0.143 0.124 0.000 0.000 chr16 278164 292215
view PDIA3 178 68 70 29 0 0 0.690 0.264 0.271 0.112 0.000 0.000 chr15 43741438 43778278
view PDIA4 175 54 70 43 0 0 0.678 0.209 0.271 0.167 0.000 0.000 chr7 148998062 149033505
view PDIA5 165 49 59 38 0 0 0.640 0.190 0.229 0.147 0.000 0.000 chr3 123062025 123167104
view PDIA6 170 47 78 49 0 0 0.659 0.182 0.302 0.190 0.000 0.000 chr2 10778391 10817785
view PDIK1L 174 45 82 59 0 0 0.674 0.174 0.318 0.229 0.000 0.000 chr1 26106824 26130555
view PDILT 202 62 45 36 0 0 0.783 0.240 0.174 0.140 0.000 0.000 chr16 20354175 20409737
view PDK1 170 50 77 50 0 0 0.659 0.194 0.298 0.194 0.000 0.000 chr2 172551090 172613669
view PDK2 198 65 51 31 0 0 0.767 0.252 0.198 0.120 0.000 0.000 chr17 50090351 50117152
view PDK3 66 21 178 76 0 0 0.256 0.081 0.690 0.295 0.000 0.000 chrX 24460286 24539422
view PDK4 191 57 61 42 1 1 0.740 0.221 0.236 0.163 0.004 0.004 chr7 95578499 95601516
view PDLIM1 168 49 62 38 0 0 0.651 0.190 0.240 0.147 0.000 0.000 chr10 95232572 95296003
view PDLIM2 189 58 60 39 0 0 0.733 0.225 0.233 0.151 0.000 0.000 chr8 22575475 22599298
view PDLIM3 205 71 39 24 0 0 0.795 0.275 0.151 0.093 0.000 0.000 chr4 185495660 185540507
view PDLIM4 204 68 47 31 0 0 0.791 0.264 0.182 0.120 0.000 0.000 chr5 132252696 132278454
view PDLIM5 108 27 98 49 0 0 0.419 0.105 0.380 0.190 0.000 0.000 chr4 94446942 94673223
view PDLIM7 219 72 32 27 0 0 0.849 0.279 0.124 0.105 0.000 0.000 chr5 177478394 177502604
view PDP1 194 67 57 32 0 0 0.752 0.260 0.221 0.124 0.000 0.000 chr8 93911923 93931068
view PDP2 177 51 73 50 0 0 0.686 0.198 0.283 0.194 0.000 0.000 chr16 66875515 66896101
view PDPK1 91 13 119 56 0 0 0.353 0.050 0.461 0.217 0.000 0.000 chr16 2533021 2608188
view PDPN 222 83 31 18 0 0 0.860 0.322 0.120 0.070 0.000 0.000 chr1 13578832 13622957
view PDPR 144 49 83 31 0 0 0.558 0.190 0.322 0.120 0.000 0.000 chr16 70109332 70167537
view PDRG1 171 38 79 62 1 0 0.663 0.147 0.306 0.240 0.004 0.000 chr20 31939337 31957046
view PDS5A 177 60 64 37 0 0 0.686 0.233 0.248 0.143 0.000 0.000 chr4 39817863 39982911
view PDS5B 166 55 66 36 0 0 0.643 0.213 0.256 0.140 0.000 0.000 chr13 32581452 32783019
view PDSS1 207 69 37 25 1 1 0.802 0.267 0.143 0.097 0.004 0.004 chr10 26692701 26751798
view PDSS2 129 30 81 51 0 0 0.500 0.116 0.314 0.198 0.000 0.000 chr6 107147562 107464564
view PDX1 216 77 38 24 1 1 0.837 0.298 0.147 0.093 0.004 0.004 chr13 27915000 27931313
view PDXDC1 139 47 90 40 1 1 0.539 0.182 0.349 0.155 0.004 0.004 chr16 14970026 15043332
view PDXK 178 47 58 42 0 0 0.690 0.182 0.225 0.163 0.000 0.000 chr21 43714129 43767299
view PDXP 208 72 45 29 1 1 0.806 0.279 0.174 0.112 0.004 0.004 chr22 37653723 37671932
view PDYN 194 63 59 37 0 0 0.752 0.244 0.229 0.143 0.000 0.000 chr20 1973759 1999058
view PDZD11 89 25 164 77 1 0 0.345 0.097 0.636 0.298 0.004 0.000 chrX 70281595 70294927
view PDZD2 107 20 70 44 0 0 0.415 0.078 0.271 0.171 0.000 0.000 chr5 31634131 32115932
view PDZD4 79 16 166 76 0 0 0.306 0.062 0.643 0.295 0.000 0.000 chrX 153797166 153835544
view PDZD7 215 68 32 28 0 0 0.833 0.264 0.124 0.109 0.000 0.000 chr10 101002679 101036129
view PDZD8 160 54 84 45 0 0 0.620 0.209 0.326 0.174 0.000 0.000 chr10 117272274 117380440
view PDZD9 182 68 67 33 0 0 0.705 0.264 0.260 0.128 0.000 0.000 chr16 21978865 22006116
view PDZK1IP1 212 72 43 30 0 0 0.822 0.279 0.167 0.116 0.000 0.000 chr1 47178582 47195036
view PDZK1 160 46 76 44 1 0 0.620 0.178 0.295 0.171 0.004 0.000 chr1 145665985 145712368
view PDZRN3 107 18 85 53 0 0 0.415 0.070 0.329 0.205 0.000 0.000 chr3 73377431 73629941