Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PDZRN4 103 33 73 34 0 0 0.399 0.128 0.283 0.132 0.000 0.000 chr12 41183320 41579745
view PEA15 185 61 69 40 0 0 0.717 0.236 0.267 0.155 0.000 0.000 chr1 160200384 160220372
view PEAK1 162 56 73 38 0 0 0.628 0.217 0.283 0.147 0.000 0.000 chr15 77103158 77425104
view PEAK3 226 80 27 20 0 0 0.876 0.310 0.105 0.078 0.000 0.000 chr19 2269631 2287175
view PEAR1 191 61 52 33 0 0 0.740 0.236 0.202 0.128 0.000 0.000 chr1 156888718 156921429
view PEBP1 212 82 43 22 0 0 0.822 0.318 0.167 0.085 0.000 0.000 chr12 118131124 118150584
view PEBP4 138 35 63 44 0 0 0.535 0.136 0.244 0.171 0.000 0.000 chr8 22708251 22932914
view PECAM1 143 32 78 49 0 0 0.554 0.124 0.302 0.190 0.000 0.000 chr17 64314415 64395860
view PECR 198 61 43 30 0 0 0.767 0.236 0.167 0.116 0.000 0.000 chr2 216033388 216086809
view PEDS1 182 57 64 40 1 1 0.705 0.221 0.248 0.155 0.004 0.004 chr20 50113254 50158723
view PEF1 172 53 76 45 0 0 0.667 0.205 0.295 0.174 0.000 0.000 chr1 31624866 31649876
view PEG3 207 72 42 25 0 0 0.802 0.279 0.163 0.097 0.000 0.000 chr19 56805082 56845726
view PELI1 151 41 90 56 0 0 0.585 0.159 0.349 0.217 0.000 0.000 chr2 64087652 64149420
view PELI2 183 62 48 32 0 0 0.709 0.240 0.186 0.124 0.000 0.000 chr14 56113411 56306524
view PELI3 197 72 57 31 1 0 0.764 0.279 0.221 0.120 0.004 0.000 chr11 66461905 66482337
view PELO 220 84 34 19 1 0 0.853 0.326 0.132 0.074 0.004 0.000 chr5 52782916 52809044
view PELP1 157 43 76 45 0 0 0.609 0.167 0.295 0.174 0.000 0.000 chr17 4664774 4709137
view PEMT 173 47 58 40 0 0 0.671 0.182 0.225 0.155 0.000 0.000 chr17 17500563 17596708
view PENK 217 81 39 22 1 1 0.841 0.314 0.151 0.085 0.004 0.004 chr8 56435957 56451641
view PEPD 156 45 65 40 0 0 0.605 0.174 0.252 0.155 0.000 0.000 chr19 33381950 33526791
view PER1 212 77 40 22 1 1 0.822 0.298 0.155 0.085 0.004 0.004 chr17 8135472 8157404
view PER2 184 62 57 34 0 0 0.713 0.240 0.221 0.132 0.000 0.000 chr2 238239044 238293610
view PER3 204 77 43 21 0 0 0.791 0.298 0.167 0.081 0.000 0.000 chr1 7779291 7850177
view PERCC1 188 45 66 56 0 0 0.729 0.174 0.256 0.217 0.000 0.000 chr16 1426078 1439441
view PERM1 203 60 47 38 0 0 0.787 0.233 0.182 0.147 0.000 0.000 chr1 970198 987093
view PERP 214 79 36 20 0 0 0.829 0.306 0.140 0.078 0.000 0.000 chr6 138083505 138112419
view PES1 215 74 42 30 0 0 0.833 0.287 0.163 0.116 0.000 0.000 chr22 30571625 30596910
view PET100 200 61 52 38 0 0 0.775 0.236 0.202 0.147 0.000 0.000 chr19 7624793 7636956
view PET117 211 71 46 34 0 0 0.818 0.275 0.178 0.132 0.000 0.000 chr20 18132863 18148169
view PEX10 178 48 65 43 0 0 0.690 0.186 0.252 0.167 0.000 0.000 chr1 2398974 2417564
view PEX11A 215 70 38 30 0 0 0.833 0.271 0.147 0.116 0.000 0.000 chr15 89676535 89695754
view PEX11B 183 60 70 40 0 0 0.709 0.233 0.271 0.155 0.000 0.000 chr1 145906350 145923717
view PEX11G 207 71 43 26 0 0 0.802 0.275 0.167 0.101 0.000 0.000 chr19 7471875 7494035
view PEX12 217 83 39 22 0 0 0.841 0.322 0.151 0.085 0.000 0.000 chr17 35569795 35583571
view PEX13 176 59 71 41 0 0 0.682 0.229 0.275 0.159 0.000 0.000 chr2 61012720 61056990
view PEX14 128 29 78 51 0 0 0.496 0.112 0.302 0.198 0.000 0.000 chr1 10469950 10635758
view PEX16 184 47 65 50 1 0 0.713 0.182 0.252 0.194 0.004 0.000 chr11 45904663 45922877
view PEX19 188 67 66 34 0 0 0.729 0.260 0.256 0.132 0.000 0.000 chr1 160271807 160290133
view PEX1 154 53 87 47 0 0 0.597 0.205 0.337 0.182 0.000 0.000 chr7 92482025 92533520
view PEX26 198 66 48 31 0 0 0.767 0.256 0.186 0.120 0.000 0.000 chr22 18072990 18110396
view PEX2 205 73 49 29 0 0 0.795 0.283 0.190 0.112 0.000 0.000 chr8 76975258 77005078
view PEX3 205 75 46 24 0 0 0.795 0.291 0.178 0.093 0.000 0.000 chr6 143445805 143495616
view PEX5L 109 19 105 62 0 0 0.422 0.074 0.407 0.240 0.000 0.000 chr3 179789958 180041937
view PEX5 213 77 38 21 0 0 0.826 0.298 0.147 0.081 0.000 0.000 chr12 7184686 7216459
view PEX6 188 57 60 41 1 1 0.729 0.221 0.233 0.159 0.004 0.004 chr6 42958865 42984181
view PEX7 164 49 80 52 0 0 0.636 0.190 0.310 0.202 0.000 0.000 chr6 136817592 136918934
view PF4V1 223 87 32 15 1 1 0.864 0.337 0.124 0.058 0.004 0.004 chr4 73848296 73859483
view PF4 182 58 75 46 0 0 0.705 0.225 0.291 0.178 0.000 0.000 chr4 73975811 73987027
view PFAS 193 61 59 38 1 1 0.748 0.236 0.229 0.147 0.004 0.004 chr17 8244289 8275486
view PFDN1 164 58 79 42 0 0 0.636 0.225 0.306 0.163 0.000 0.000 chr5 140240035 140308101