Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PGP 225 75 28 25 1 1 0.872 0.291 0.109 0.097 0.004 0.004 chr16 2206593 2219840
view PGRMC1 67 9 184 92 0 0 0.260 0.035 0.713 0.357 0.000 0.000 chrX 119231285 119249466
view PGRMC2 217 80 39 24 0 0 0.841 0.310 0.151 0.093 0.000 0.000 chr4 128264242 128292813
view PGR 126 21 118 76 0 0 0.488 0.081 0.457 0.295 0.000 0.000 chr11 101024624 101134813
view PGS1 198 65 41 27 0 0 0.767 0.252 0.159 0.105 0.000 0.000 chr17 78373649 78429659
view PHACTR1 54 3 94 56 0 0 0.209 0.012 0.364 0.217 0.000 0.000 chr6 12711767 13292837
view PHACTR2 154 43 58 40 0 0 0.597 0.167 0.225 0.155 0.000 0.000 chr6 143672965 143836185
view PHACTR3 124 31 66 42 0 0 0.481 0.120 0.256 0.163 0.000 0.000 chr20 59599540 59852711
view PHACTR4 113 18 115 68 0 0 0.438 0.070 0.446 0.264 0.000 0.000 chr1 28364740 28505364
view PHAF1 114 23 109 63 0 0 0.442 0.089 0.422 0.244 0.000 0.000 chr16 67104941 67153544
view PHAX 190 67 58 32 0 0 0.736 0.260 0.225 0.124 0.000 0.000 chr5 126595947 126632252
view PHB1 220 80 36 23 0 0 0.853 0.310 0.140 0.089 0.000 0.000 chr17 49399052 49419882
view PHB2 188 55 64 44 1 1 0.729 0.213 0.248 0.171 0.004 0.004 chr12 6960327 6975664
view PHC1 184 68 63 32 0 0 0.713 0.264 0.244 0.124 0.000 0.000 chr12 8909509 8946467
view PHC2 184 71 54 26 0 0 0.713 0.275 0.209 0.101 0.000 0.000 chr1 33318626 33436095
view PHC3 165 54 75 41 0 0 0.640 0.209 0.291 0.159 0.000 0.000 chr3 170082584 170186733
view PHETA1 189 64 65 38 0 0 0.733 0.248 0.252 0.147 0.000 0.000 chr12 111355679 111374095
view PHETA2 202 71 55 33 0 0 0.783 0.275 0.213 0.128 0.000 0.000 chr22 42069248 42084438
view PHEX 54 12 164 72 0 0 0.209 0.047 0.636 0.279 0.000 0.000 chrX 22027325 22256310
view PHF10 196 73 57 29 1 1 0.760 0.283 0.221 0.112 0.004 0.004 chr6 169698902 169729500
view PHF11 206 71 43 26 0 0 0.798 0.275 0.167 0.101 0.000 0.000 chr13 49490953 49533976
view PHF12 115 27 130 73 0 0 0.446 0.105 0.504 0.283 0.000 0.000 chr17 28900250 28956518
view PHF13 205 66 49 36 1 0 0.795 0.256 0.190 0.140 0.004 0.000 chr1 6608731 6629030
view PHF14 148 41 80 47 0 0 0.574 0.159 0.310 0.182 0.000 0.000 chr7 10968872 11174618
view PHF19 203 76 47 22 0 0 0.787 0.295 0.182 0.085 0.000 0.000 chr9 120850651 120882188
view PHF1 181 54 74 48 0 0 0.702 0.209 0.287 0.186 0.000 0.000 chr6 33406014 33421439
view PHF20L1 195 74 54 25 0 0 0.756 0.287 0.209 0.097 0.000 0.000 chr8 132770388 132853807
view PHF20 102 23 133 73 0 0 0.395 0.089 0.516 0.283 0.000 0.000 chr20 35767015 35955370
view PHF21A 139 39 96 55 0 0 0.539 0.151 0.372 0.213 0.000 0.000 chr11 45924319 46126454
view PHF21B 149 41 68 43 0 0 0.578 0.159 0.264 0.167 0.000 0.000 chr22 44876162 45015005
view PHF23 196 62 56 37 0 0 0.760 0.240 0.217 0.143 0.000 0.000 chr17 7230038 7244457
view PHF24 224 82 30 20 0 0 0.868 0.318 0.116 0.078 0.000 0.000 chr9 34953285 34987544
view PHF2 174 58 55 29 0 0 0.674 0.225 0.213 0.112 0.000 0.000 chr9 93571584 93684587
view PHF3 159 46 81 48 0 0 0.616 0.178 0.314 0.186 0.000 0.000 chr6 63630802 63731011
view PHF5A 203 73 51 28 0 0 0.787 0.283 0.198 0.109 0.000 0.000 chr22 41454717 41473692
view PHF6 80 28 165 66 0 0 0.310 0.109 0.640 0.256 0.000 0.000 chrX 134368312 134433790
view PHF7 180 60 71 39 0 0 0.698 0.233 0.275 0.151 0.000 0.000 chr3 52405660 52428641
view PHF8 29 0 203 86 0 0 0.112 0.000 0.787 0.333 0.000 0.000 chrX 53931680 54049473
view PHGDH 199 67 48 30 0 0 0.771 0.260 0.186 0.116 0.000 0.000 chr1 119706934 119749215
view PHGR1 217 82 38 21 1 0 0.841 0.318 0.147 0.081 0.004 0.000 chr15 40346033 40361434
view PHIP 158 49 90 50 0 0 0.612 0.190 0.349 0.194 0.000 0.000 chr6 78929419 79083254
view PHKA1 57 15 188 82 0 0 0.221 0.058 0.729 0.318 0.000 0.000 chrX 72573814 72719306
view PHKA2 37 6 190 82 0 0 0.143 0.023 0.736 0.318 0.000 0.000 chrX 18887298 18989114
view PHKB 48 1 168 90 0 0 0.186 0.004 0.651 0.349 0.000 0.000 chr16 47456331 47706523
view PHKG1 208 71 44 28 0 0 0.806 0.275 0.171 0.109 0.000 0.000 chr7 56075295 56097952
view PHKG2 131 22 122 80 0 0 0.508 0.085 0.473 0.310 0.000 0.000 chr16 30743425 30766176
view PHLDA1 230 85 26 18 1 1 0.891 0.329 0.101 0.070 0.004 0.004 chr12 76020447 76036776
view PHLDA2 187 53 62 44 1 0 0.725 0.205 0.240 0.171 0.004 0.000 chr11 2923273 2934420
view PHLDA3 220 79 36 25 1 0 0.853 0.306 0.140 0.097 0.004 0.000 chr1 201459278 201474188
view PHLDB1 177 60 71 41 0 0 0.686 0.233 0.275 0.159 0.000 0.000 chr11 118602615 118663028