Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SERF2 195 71 61 32 0 0 0.756 0.275 0.236 0.124 0.000 0.000 chr15 43787320 43801079
view SERGEF 112 24 100 58 0 0 0.434 0.093 0.388 0.225 0.000 0.000 chr11 17783048 18018047
view SERHL2 215 78 38 22 0 0 0.833 0.302 0.147 0.085 0.000 0.000 chr22 42548956 42579382
view SERINC1 182 64 68 36 0 0 0.705 0.248 0.264 0.140 0.000 0.000 chr6 122438351 122476807
view SERINC2 187 55 64 43 0 0 0.725 0.213 0.248 0.167 0.000 0.000 chr1 31408213 31439678
view SERINC3 149 33 91 57 0 0 0.578 0.128 0.353 0.221 0.000 0.000 chr20 44492441 44527070
view SERINC4 190 68 66 35 0 0 0.736 0.264 0.256 0.136 0.000 0.000 chr15 43789162 43805220
view SERINC5 142 28 67 47 0 0 0.550 0.109 0.260 0.182 0.000 0.000 chr5 80133727 80261048
view SERP1 216 75 39 27 1 1 0.837 0.291 0.151 0.105 0.004 0.004 chr3 150536998 150551496
view SERP2 176 51 72 44 0 0 0.682 0.198 0.279 0.171 0.000 0.000 chr13 44368824 44402714
view SERPINA10 210 73 40 25 0 0 0.814 0.283 0.155 0.097 0.000 0.000 chr14 94275460 94298268
view SERPINA11 225 82 32 22 1 1 0.872 0.318 0.124 0.085 0.004 0.004 chr14 94437464 94457800
view SERPINA12 222 78 26 20 0 0 0.860 0.302 0.101 0.078 0.000 0.000 chr14 94482279 94514469
view SERPINA1 221 77 34 26 1 0 0.857 0.298 0.132 0.101 0.004 0.000 chr14 94371747 94393602
view SERPINA3 237 90 14 12 3 0 0.919 0.349 0.054 0.047 0.012 0.000 chr14 94607391 94629053
view SERPINA4 213 77 38 23 3 2 0.826 0.298 0.147 0.089 0.012 0.008 chr14 94556442 94574906
view SERPINA5 231 87 24 16 0 0 0.895 0.337 0.093 0.062 0.000 0.000 chr14 94576426 94598118
view SERPINA6 213 79 42 24 1 1 0.826 0.306 0.163 0.093 0.004 0.004 chr14 94299248 94328336
view SERPINA7 89 30 168 74 0 0 0.345 0.116 0.651 0.287 0.000 0.000 chrX 106027435 106043727
view SERPINA9 232 88 16 13 8 2 0.899 0.341 0.062 0.050 0.031 0.008 chr14 94457721 94481197
view SERPINB10 193 64 54 35 0 0 0.748 0.248 0.209 0.136 0.000 0.000 chr18 63902958 63941111
view SERPINB11 210 79 44 23 0 0 0.814 0.306 0.171 0.089 0.000 0.000 chr18 63697960 63728893
view SERPINB12 200 78 55 24 0 0 0.775 0.302 0.213 0.093 0.000 0.000 chr18 63537369 63574329
view SERPINB13 219 87 37 16 0 0 0.849 0.337 0.143 0.062 0.000 0.000 chr18 63582343 63604192
view SERPINB1 238 91 20 14 0 0 0.922 0.353 0.078 0.054 0.000 0.000 chr6 2827332 2846863
view SERPINB2 213 75 37 25 0 0 0.826 0.291 0.143 0.097 0.000 0.000 chr18 63882705 63908888
view SERPINB3 235 94 21 10 0 0 0.911 0.364 0.081 0.039 0.000 0.000 chr18 63650197 63666893
view SERPINB4 211 82 45 22 0 0 0.818 0.318 0.174 0.085 0.000 0.000 chr18 63632259 63649256
view SERPINB5 204 74 46 24 0 0 0.791 0.287 0.178 0.093 0.000 0.000 chr18 63471958 63510085
view SERPINB6 191 63 54 34 0 0 0.740 0.244 0.209 0.132 0.000 0.000 chr6 2943159 2976567
view SERPINB7 215 75 38 26 0 0 0.833 0.291 0.147 0.101 0.000 0.000 chr18 63770418 63810370
view SERPINB8 232 87 21 13 0 0 0.899 0.337 0.081 0.050 0.000 0.000 chr18 63965081 63994374
view SERPINB9 230 85 26 18 0 0 0.891 0.329 0.101 0.070 0.000 0.000 chr6 2882270 2908309
view SERPINC1 197 71 57 32 0 0 0.764 0.275 0.221 0.124 0.000 0.000 chr1 173898800 173922327
view SERPIND1 205 75 49 27 0 0 0.795 0.291 0.190 0.105 0.000 0.000 chr22 20769113 20792720
view SERPINE1 217 81 37 20 0 0 0.841 0.314 0.143 0.078 0.000 0.000 chr7 101122104 101144247
view SERPINE2 186 61 49 29 0 0 0.721 0.236 0.190 0.112 0.000 0.000 chr2 223970045 224044286
view SERPINE3 215 79 38 23 0 0 0.833 0.306 0.147 0.089 0.000 0.000 chr13 51334691 51369735
view SERPINF1 221 77 34 26 1 0 0.857 0.298 0.132 0.101 0.004 0.000 chr17 1757060 1782565
view SERPINF2 222 77 26 19 1 0 0.860 0.298 0.101 0.074 0.004 0.000 chr17 1737871 1760265
view SERPING1 171 43 78 54 0 0 0.663 0.167 0.302 0.209 0.000 0.000 chr11 57592685 57619848
view SERPINH1 217 79 38 23 0 0 0.841 0.306 0.147 0.089 0.000 0.000 chr11 75557253 75577783
view SERPINI1 115 27 100 50 0 0 0.446 0.105 0.388 0.194 0.000 0.000 chr3 167730721 167830569
view SERPINI2 175 59 80 43 0 0 0.678 0.229 0.310 0.167 0.000 0.000 chr3 167436933 167479042
view SERTAD1 183 48 71 53 0 0 0.709 0.186 0.275 0.205 0.000 0.000 chr19 40416589 40430992
view SERTAD2 211 76 41 24 1 0 0.818 0.295 0.159 0.093 0.004 0.000 chr2 64626621 64658913
view SERTAD3 188 55 65 46 0 0 0.729 0.213 0.252 0.178 0.000 0.000 chr19 40435844 40449335
view SERTAD4 209 71 43 31 0 0 0.810 0.275 0.167 0.120 0.000 0.000 chr1 210227796 210251255
view SERTM1 218 78 36 23 0 0 0.845 0.302 0.140 0.089 0.000 0.000 chr13 36669020 36702839
view SERTM2 63 9 193 95 0 0 0.244 0.035 0.748 0.368 0.000 0.000 chrX 111506645 111527399