Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SNCB 217 76 33 23 0 0 0.841 0.295 0.128 0.089 0.000 0.000 chr5 176615082 176635534
view SNCG 199 60 56 44 2 0 0.771 0.233 0.217 0.171 0.008 0.000 chr10 86953599 86968258
view SND1 130 33 102 63 0 0 0.504 0.128 0.395 0.244 0.000 0.000 chr7 127647194 128097593
view SNED1 171 54 53 28 0 0 0.663 0.209 0.205 0.109 0.000 0.000 chr2 240993618 241100568
view SNF8 195 67 53 29 0 0 0.756 0.260 0.205 0.112 0.000 0.000 chr17 48924316 48949842
view SNIP1 196 62 54 41 0 0 0.760 0.240 0.209 0.159 0.000 0.000 chr1 37529449 37559293
view SNN 219 79 35 22 0 0 0.849 0.306 0.136 0.085 0.000 0.000 chr16 11663455 11684152
view SNORC 225 81 30 22 0 0 0.872 0.314 0.116 0.085 0.000 0.000 chr2 232865264 232883700
view SNPH 174 51 64 39 0 0 0.674 0.198 0.248 0.151 0.000 0.000 chr20 1261294 1314327
view SNRK 128 28 111 68 0 0 0.496 0.109 0.430 0.264 0.000 0.000 chr3 43281540 43356143
view SNRNP200 175 68 73 30 0 0 0.678 0.264 0.283 0.116 0.000 0.000 chr2 96269338 96310546
view SNRNP25 211 72 44 30 0 0 0.818 0.279 0.171 0.116 0.000 0.000 chr16 48828 62669
view SNRNP27 219 82 36 21 1 0 0.849 0.318 0.140 0.081 0.004 0.000 chr2 69888956 69910236
view SNRNP35 92 12 120 67 0 0 0.357 0.047 0.465 0.260 0.000 0.000 chr12 123453139 123471936
view SNRNP40 176 62 76 39 0 0 0.682 0.240 0.295 0.151 0.000 0.000 chr1 31254568 31301788
view SNRNP48 212 77 40 23 0 0 0.822 0.298 0.155 0.089 0.000 0.000 chr6 7585198 7616967
view SNRNP70 182 51 65 43 0 0 0.705 0.198 0.252 0.167 0.000 0.000 chr19 49080451 49113604
view SNRPA1 220 77 35 25 0 0 0.853 0.298 0.136 0.097 0.000 0.000 chr15 101276510 101300248
view SNRPA 205 71 50 31 0 0 0.795 0.275 0.194 0.120 0.000 0.000 chr19 40746203 40770389
view SNRPB2 235 88 23 17 0 0 0.911 0.341 0.089 0.066 0.000 0.000 chr20 16725026 16747564
view SNRPB 186 64 70 40 0 0 0.721 0.248 0.271 0.155 0.000 0.000 chr20 2456642 2475789
view SNRPC 183 61 72 41 0 0 0.709 0.236 0.279 0.159 0.000 0.000 chr6 34752505 34778857
view SNRPD1 178 59 73 41 0 0 0.690 0.229 0.283 0.159 0.000 0.000 chr18 21607314 21638520
view SNRPD2 218 79 36 23 0 0 0.845 0.306 0.140 0.089 0.000 0.000 chr19 45682460 45696953
view SNRPD3 199 69 52 30 0 0 0.771 0.267 0.202 0.116 0.000 0.000 chr22 24550999 24579971
view SNRPE 207 74 49 29 0 0 0.802 0.287 0.190 0.112 0.000 0.000 chr1 203856599 203876152
view SNRPF 219 82 38 22 0 0 0.849 0.318 0.147 0.085 0.000 0.000 chr12 95853952 95871140
view SNRPG 212 80 44 23 1 1 0.822 0.310 0.171 0.089 0.004 0.004 chr2 70276362 70298740
view SNRPN 172 48 75 49 0 0 0.667 0.186 0.291 0.190 0.000 0.000 chr15 24949987 24983723
view SNTA1 176 55 70 40 0 0 0.682 0.213 0.271 0.155 0.000 0.000 chr20 33402957 33448763
view SNTB1 126 37 64 37 0 0 0.488 0.143 0.248 0.143 0.000 0.000 chr8 120530756 120817046
view SNTB2 108 19 104 59 0 0 0.419 0.074 0.403 0.229 0.000 0.000 chr16 69182164 69314052
view SNTG1 53 7 120 60 0 0 0.205 0.027 0.465 0.233 0.000 0.000 chr8 49906407 50801692
view SNTG2 94 13 77 49 0 0 0.364 0.050 0.298 0.190 0.000 0.000 chr2 945849 1372613
view SNTN 224 90 31 13 0 0 0.868 0.349 0.120 0.050 0.000 0.000 chr3 63647675 63670212
view SNU13 187 58 66 43 0 0 0.725 0.225 0.256 0.167 0.000 0.000 chr22 41668933 41693867
view SNUPN 171 57 70 36 0 0 0.663 0.221 0.271 0.140 0.000 0.000 chr15 75593086 75630725
view SNURF 192 59 59 40 0 0 0.744 0.229 0.229 0.155 0.000 0.000 chr15 24949987 24973821
view SNW1 182 60 66 40 0 0 0.705 0.233 0.256 0.155 0.000 0.000 chr14 77712599 77766156
view SNX10 194 64 48 33 0 0 0.752 0.248 0.186 0.128 0.000 0.000 chr7 26286862 26379383
view SNX11 207 75 49 28 0 0 0.802 0.291 0.190 0.109 0.000 0.000 chr17 48102766 48128601
view SNX12 90 24 167 80 0 0 0.349 0.093 0.647 0.310 0.000 0.000 chrX 71054247 71073334
view SNX13 168 56 67 38 0 0 0.651 0.217 0.260 0.147 0.000 0.000 chr7 17785761 17945494
view SNX14 179 64 63 32 0 0 0.694 0.248 0.244 0.124 0.000 0.000 chr6 85500496 85598858
view SNX15 168 46 85 56 1 1 0.651 0.178 0.329 0.217 0.004 0.004 chr11 65022439 65045572
view SNX16 152 35 86 53 0 0 0.589 0.136 0.333 0.205 0.000 0.000 chr8 81794583 81847185
view SNX17 185 61 70 42 0 0 0.717 0.236 0.271 0.163 0.000 0.000 chr2 27365616 27382535
view SNX18 194 66 54 33 0 0 0.752 0.256 0.209 0.128 0.000 0.000 chr5 54512759 54551586
view SNX19 206 75 44 26 0 0 0.798 0.291 0.171 0.101 0.000 0.000 chr11 130861250 130921479
view SNX1 134 34 112 62 0 0 0.519 0.132 0.434 0.240 0.000 0.000 chr15 64090982 64149231