Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view STAP2 193 55 58 44 0 0 0.748 0.213 0.225 0.171 0.000 0.000 chr19 4319043 4343827
view STARD10 187 57 51 32 0 0 0.725 0.221 0.198 0.124 0.000 0.000 chr11 72749729 72799047
view STARD13 150 45 49 29 0 0 0.581 0.174 0.190 0.112 0.000 0.000 chr13 33098137 33290755
view STARD3NL 201 73 47 24 1 1 0.779 0.283 0.182 0.093 0.004 0.004 chr7 38173245 38235669
view STARD3 157 44 88 54 0 0 0.609 0.171 0.341 0.209 0.000 0.000 chr17 39632144 39669201
view STARD4 215 78 38 23 0 0 0.833 0.302 0.147 0.089 0.000 0.000 chr5 111491033 111517535
view STARD5 225 87 31 17 0 0 0.872 0.337 0.120 0.066 0.000 0.000 chr15 81304053 81329141
view STARD6 174 50 69 44 0 0 0.674 0.194 0.267 0.171 0.000 0.000 chr18 54319492 54362858
view STARD7 178 68 71 32 0 0 0.690 0.264 0.275 0.124 0.000 0.000 chr2 96179859 96213827
view STARD8 38 1 188 83 0 0 0.147 0.004 0.729 0.322 0.000 0.000 chrX 68642666 68730836
view STARD9 104 22 105 58 0 0 0.403 0.085 0.407 0.225 0.000 0.000 chr15 42570606 42725998
view STAR 217 79 38 24 0 0 0.841 0.306 0.147 0.093 0.000 0.000 chr8 38137700 38155952
view STAT1 206 77 37 17 0 0 0.798 0.298 0.143 0.066 0.000 0.000 chr2 190964149 191019171
view STAT2 133 37 107 59 0 0 0.516 0.143 0.415 0.229 0.000 0.000 chr12 56336597 56365107
view STAT3 150 46 83 46 0 0 0.581 0.178 0.322 0.178 0.000 0.000 chr17 42308324 42393442
view STAT4 144 36 72 50 0 0 0.558 0.140 0.279 0.194 0.000 0.000 chr2 191024576 191155994
view STAT5A 178 51 63 37 0 0 0.690 0.198 0.244 0.143 0.000 0.000 chr17 42283498 42316943
view STAT5B 129 32 94 51 0 0 0.500 0.124 0.364 0.198 0.000 0.000 chr17 42194177 42281391
view STAT6 183 52 65 43 0 0 0.709 0.202 0.252 0.167 0.000 0.000 chr12 57090408 57116362
view STATH 204 71 52 32 1 1 0.791 0.275 0.202 0.124 0.004 0.004 chr4 69990966 70007570
view STAU1 182 65 67 34 0 0 0.705 0.252 0.260 0.132 0.000 0.000 chr20 49108339 49193334
view STAU2 119 27 88 53 0 0 0.461 0.105 0.341 0.205 0.000 0.000 chr8 73415369 73751840
view STBD1 221 82 33 19 1 1 0.857 0.318 0.128 0.074 0.004 0.004 chr4 76301733 76316130
view STC1 221 80 33 22 0 0 0.857 0.310 0.128 0.085 0.000 0.000 chr8 23836929 23859806
view STC2 224 79 30 22 0 0 0.868 0.306 0.116 0.085 0.000 0.000 chr5 173309723 173333414
view STEAP1B 191 69 42 26 0 0 0.740 0.267 0.163 0.101 0.000 0.000 chr7 22414444 22505188
view STEAP1 210 78 45 25 0 0 0.814 0.302 0.174 0.097 0.000 0.000 chr7 90149469 90169827
view STEAP2 194 74 61 30 0 0 0.752 0.287 0.236 0.116 0.000 0.000 chr7 90206740 90242683
view STEAP3 173 50 67 44 0 0 0.671 0.194 0.260 0.171 0.000 0.000 chr2 119218834 119270652
view STEAP4 158 50 87 48 0 0 0.612 0.194 0.337 0.186 0.000 0.000 chr7 88265892 88311894
view STEEP1 80 19 169 80 0 0 0.310 0.074 0.655 0.310 0.000 0.000 chrX 119533149 119570409
view STH 209 70 43 29 0 0 0.810 0.271 0.167 0.112 0.000 0.000 chr17 45994250 46004694
view STIL 195 71 51 28 0 0 0.756 0.275 0.198 0.109 0.000 0.000 chr1 47245139 47319147
view STIM1 149 52 75 42 0 0 0.578 0.202 0.291 0.163 0.000 0.000 chr11 3850664 4098208
view STIM2 167 56 66 39 0 0 0.647 0.217 0.256 0.151 0.000 0.000 chr4 26855841 27030381
view STIMATE 166 49 85 51 0 0 0.643 0.190 0.329 0.198 0.000 0.000 chr3 52831733 52902548
view STING1 216 79 38 22 0 0 0.837 0.306 0.147 0.085 0.000 0.000 chr5 139470533 139487758
view STIP1 188 61 62 36 0 0 0.729 0.236 0.240 0.140 0.000 0.000 chr11 64181171 64209543
view STK10 115 19 83 52 0 0 0.446 0.074 0.322 0.202 0.000 0.000 chr5 172037079 172193224
view STK11IP 170 39 75 55 0 0 0.659 0.151 0.291 0.213 0.000 0.000 chr2 219592857 219621451
view STK11 202 65 45 31 0 0 0.783 0.252 0.174 0.120 0.000 0.000 chr19 1200778 1233431
view STK16 204 70 48 29 0 0 0.791 0.271 0.186 0.112 0.000 0.000 chr2 219240479 219255337
view STK17A 195 69 53 31 0 0 0.756 0.267 0.205 0.120 0.000 0.000 chr7 43578108 43632379
view STK17B 179 56 70 43 0 0 0.694 0.217 0.271 0.167 0.000 0.000 chr2 196128583 196176578
view STK19 216 81 38 20 1 1 0.837 0.314 0.147 0.078 0.004 0.004 chr6 31967363 31986446
view STK24 160 43 75 50 0 0 0.620 0.167 0.291 0.194 0.000 0.000 chr13 98440185 98582107
view STK25 222 82 31 18 1 1 0.860 0.318 0.120 0.070 0.004 0.004 chr2 241487670 241513584
view STK26 56 9 187 86 0 0 0.217 0.035 0.725 0.333 0.000 0.000 chrX 132018302 132080943
view STK31 201 70 47 30 0 0 0.779 0.271 0.182 0.116 0.000 0.000 chr7 23705219 23837513
view STK32A 157 43 54 39 0 0 0.609 0.167 0.209 0.151 0.000 0.000 chr5 147230026 147392855