Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SULT2B1 187 48 53 40 0 0 0.725 0.186 0.205 0.155 0.000 0.000 chr19 48547172 48604423
view SULT4A1 192 61 56 35 0 0 0.744 0.236 0.217 0.136 0.000 0.000 chr22 43819509 43867513
view SULT6B1 176 59 70 38 0 0 0.682 0.229 0.271 0.147 0.000 0.000 chr2 37162820 37193670
view SUMF1 195 66 38 22 0 0 0.756 0.256 0.147 0.085 0.000 0.000 chr3 4356146 4472269
view SUMF2 205 72 51 32 0 0 0.795 0.279 0.198 0.124 0.000 0.000 chr7 56059286 56085670
view SUMO1 186 57 66 45 0 0 0.721 0.221 0.256 0.174 0.000 0.000 chr2 202201182 202243597
view SUMO2 198 66 57 37 0 0 0.767 0.256 0.221 0.143 0.000 0.000 chr17 75160586 75187959
view SUMO3 202 73 49 27 0 0 0.783 0.283 0.190 0.105 0.000 0.000 chr21 44800617 44823062
view SUMO4 208 67 50 38 0 0 0.806 0.260 0.194 0.147 0.000 0.000 chr6 149395262 149406278
view SUN1 208 68 35 25 1 1 0.806 0.264 0.136 0.097 0.004 0.004 chr7 827476 879934
view SUN2 174 52 70 44 0 0 0.674 0.202 0.271 0.171 0.000 0.000 chr22 38729734 38760998
view SUN3 206 76 44 24 0 0 0.798 0.295 0.171 0.093 0.000 0.000 chr7 47982148 48034107
view SUN5 190 62 50 33 0 0 0.736 0.240 0.194 0.128 0.000 0.000 chr20 32978775 33009433
view SUOX 210 73 43 27 0 0 0.814 0.283 0.167 0.105 0.000 0.000 chr12 55992276 56010525
view SUPT16H 153 47 86 46 0 0 0.593 0.182 0.333 0.178 0.000 0.000 chr14 21346476 21389019
view SUPT20HL1 95 36 161 68 1 0 0.368 0.140 0.624 0.264 0.004 0.000 chrX 24355639 24372839
view SUPT20HL2 82 23 173 80 0 0 0.318 0.089 0.671 0.310 0.000 0.000 chrX 24303210 24319069
view SUPT20H 151 42 89 51 0 0 0.585 0.163 0.345 0.198 0.000 0.000 chr13 37004312 37064688
view SUPT3H 131 37 89 52 0 0 0.508 0.143 0.345 0.202 0.000 0.000 chr6 44821726 45382934
view SUPT4H1 218 76 37 26 0 0 0.845 0.295 0.143 0.101 0.000 0.000 chr17 58340178 58357201
view SUPT5H 188 63 62 35 0 0 0.729 0.244 0.240 0.136 0.000 0.000 chr19 39440582 39481670
view SUPT6H 117 25 106 55 0 0 0.453 0.097 0.411 0.213 0.000 0.000 chr17 28657205 28707679
view SUPT7L 182 64 70 36 0 0 0.705 0.248 0.271 0.140 0.000 0.000 chr2 27645809 27668614
view SUPV3L1 176 56 69 40 0 0 0.682 0.217 0.267 0.155 0.000 0.000 chr10 69175234 69214093
view SURF1 221 79 35 24 0 0 0.857 0.306 0.136 0.093 0.000 0.000 chr9 133346758 133361487
view SURF2 223 79 33 24 0 0 0.864 0.306 0.128 0.093 0.000 0.000 chr9 133351550 133366158
view SURF4 211 68 40 31 0 0 0.818 0.264 0.155 0.120 0.000 0.000 chr9 133356464 133381060
view SURF6 204 68 48 32 0 0 0.791 0.264 0.186 0.124 0.000 0.000 chr9 133323776 133341188
view SUSD1 168 51 39 24 0 0 0.651 0.198 0.151 0.093 0.000 0.000 chr9 112035783 112180297
view SUSD2 210 77 43 24 1 0 0.814 0.298 0.167 0.093 0.004 0.000 chr22 24176487 24194106
view SUSD3 169 55 75 42 0 0 0.655 0.213 0.291 0.163 0.000 0.000 chr9 93053701 93090133
view SUSD4 137 41 85 46 0 0 0.531 0.159 0.329 0.178 0.000 0.000 chr1 223215831 223369176
view SUSD5 201 67 43 29 0 0 0.779 0.260 0.167 0.112 0.000 0.000 chr3 33145043 33223810
view SUSD6 143 41 104 57 0 0 0.554 0.159 0.403 0.221 0.000 0.000 chr14 69606596 69720144
view SUV39H1 64 8 184 88 0 0 0.248 0.031 0.713 0.341 0.000 0.000 chrX 48691734 48714016
view SUV39H2 209 75 39 23 0 0 0.810 0.291 0.151 0.089 0.000 0.000 chr10 14873866 14909315
view SUZ12 139 34 93 55 0 0 0.539 0.132 0.360 0.213 0.000 0.000 chr17 31932007 32006038
view SV2A 181 50 69 49 0 0 0.702 0.194 0.267 0.190 0.000 0.000 chr1 149898318 149922844
view SV2B 106 7 103 70 0 0 0.411 0.027 0.399 0.271 0.000 0.000 chr15 91095257 91307565
view SV2C 116 28 77 46 0 0 0.450 0.109 0.298 0.178 0.000 0.000 chr5 76078383 76338956
view SVBP 196 70 57 30 0 0 0.760 0.271 0.221 0.116 0.000 0.000 chr1 42802052 42822397
view SVEP1 180 56 37 25 0 0 0.698 0.217 0.143 0.097 0.000 0.000 chr9 110360248 110584741
view SVIL 144 29 71 46 0 0 0.558 0.112 0.275 0.178 0.000 0.000 chr10 29452338 29639971
view SVIP 214 77 39 24 1 1 0.829 0.298 0.151 0.093 0.004 0.004 chr11 22813927 22834801
view SVOPL 179 58 48 29 0 0 0.694 0.225 0.186 0.112 0.000 0.000 chr7 138589285 138706362
view SVOP 143 38 69 37 0 0 0.554 0.147 0.267 0.143 0.000 0.000 chr12 108902741 109026068
view SWAP70 146 49 86 45 0 0 0.566 0.190 0.333 0.174 0.000 0.000 chr11 9659077 9757993
view SWI5 192 71 62 32 0 0 0.744 0.275 0.240 0.124 0.000 0.000 chr9 128271276 128293989
view SWSAP1 200 63 52 38 0 0 0.775 0.244 0.202 0.147 0.000 0.000 chr19 11369666 11381169
view SWT1 162 49 70 48 0 0 0.628 0.190 0.271 0.186 0.000 0.000 chr1 185152167 185296781