Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view STX11 188 74 55 26 0 0 0.729 0.287 0.213 0.101 0.000 0.000 chr6 144145517 144196939
view STX12 113 29 116 60 0 0 0.438 0.112 0.450 0.233 0.000 0.000 chr1 27768219 27829443
view STX16 191 62 54 31 0 0 0.740 0.240 0.209 0.120 0.000 0.000 chr20 58646283 58684526
view STX17 146 42 97 56 0 0 0.566 0.163 0.376 0.217 0.000 0.000 chr9 99901654 99979534
view STX18 122 19 91 57 0 0 0.473 0.074 0.353 0.221 0.000 0.000 chr4 4413968 4547048
view STX19 195 64 59 40 0 0 0.756 0.248 0.229 0.155 0.000 0.000 chr3 94009365 94033597
view STX1A 199 66 51 31 0 0 0.771 0.256 0.198 0.120 0.000 0.000 chr7 73694210 73724669
view STX1B 140 29 105 66 0 0 0.543 0.112 0.407 0.256 0.000 0.000 chr16 30984256 31015638
view STX2 189 56 52 37 0 0 0.733 0.217 0.202 0.143 0.000 0.000 chr12 130784600 130844250
view STX3 108 22 124 65 0 0 0.419 0.085 0.481 0.252 0.000 0.000 chr11 59750376 59810878
view STX4 130 19 121 80 0 0 0.504 0.074 0.469 0.310 0.000 0.000 chr16 31028558 31045164
view STX5 189 71 59 27 0 0 0.733 0.275 0.229 0.105 0.000 0.000 chr11 62801860 62837051
view STX6 174 61 66 33 0 0 0.674 0.236 0.256 0.128 0.000 0.000 chr1 180967725 181027870
view STX7 189 64 50 32 0 0 0.733 0.248 0.194 0.124 0.000 0.000 chr6 132440867 132518116
view STX8 93 13 78 49 0 0 0.360 0.050 0.302 0.190 0.000 0.000 chr17 9245471 9580820
view STXBP1 149 39 93 55 0 0 0.578 0.151 0.360 0.213 0.000 0.000 chr9 127607277 127697699
view STXBP2 214 69 42 34 0 0 0.829 0.267 0.163 0.132 0.000 0.000 chr19 7632110 7652873
view STXBP3 166 48 78 46 0 0 0.643 0.186 0.302 0.178 0.000 0.000 chr1 108741674 108814523
view STXBP4 188 71 56 27 0 0 0.729 0.275 0.217 0.105 0.000 0.000 chr17 54963765 55178632
view STXBP5L 144 34 64 41 0 0 0.558 0.132 0.248 0.159 0.000 0.000 chr3 120903205 121429761
view STXBP5 174 63 65 34 0 0 0.674 0.244 0.252 0.132 0.000 0.000 chr6 147199417 147395473
view STXBP6 120 29 69 36 0 0 0.465 0.112 0.267 0.140 0.000 0.000 chr14 24804454 25055147
view STYK1 183 52 55 39 0 0 0.709 0.202 0.213 0.151 0.000 0.000 chr12 10613923 10679052
view STYXL1 177 58 63 34 0 0 0.686 0.225 0.244 0.132 0.000 0.000 chr7 75991342 76053000
view STYXL2 180 49 66 46 0 0 0.698 0.190 0.256 0.178 0.000 0.000 chr1 167089075 167134165
view STYX 184 63 63 33 0 0 0.713 0.244 0.244 0.128 0.000 0.000 chr14 52725166 52779989
view SUB1 222 84 32 19 0 0 0.860 0.326 0.124 0.074 0.000 0.000 chr5 32580557 32609079
view SUCLA2 178 55 68 43 0 0 0.690 0.213 0.264 0.167 0.000 0.000 chr13 47937656 48006273
view SUCLG1 131 18 105 76 0 0 0.508 0.070 0.407 0.295 0.000 0.000 chr2 84418528 84464280
view SUCLG2 139 47 53 29 0 0 0.539 0.182 0.205 0.112 0.000 0.000 chr3 67369719 67659612
view SUCNR1 227 87 27 18 0 0 0.880 0.337 0.105 0.070 0.000 0.000 chr3 151868643 151889619
view SUCO 169 57 65 37 0 0 0.655 0.221 0.252 0.143 0.000 0.000 chr1 172528150 172616833
view SUDS3 203 76 45 24 1 1 0.787 0.295 0.174 0.093 0.004 0.004 chr12 118371555 118423033
view SUFU 133 42 93 47 0 0 0.516 0.163 0.360 0.182 0.000 0.000 chr10 102498972 102638535
view SUGCT 4 0 62 12 0 0 0.016 0.000 0.240 0.047 0.000 0.000 chr7 40130005 40865763
view SUGP1 165 41 82 54 0 0 0.640 0.159 0.318 0.209 0.000 0.000 chr19 19271033 19325509
view SUGP2 150 37 90 55 0 0 0.581 0.143 0.349 0.213 0.000 0.000 chr19 18985893 19038517
view SUGT1 154 39 85 57 0 0 0.597 0.151 0.329 0.221 0.000 0.000 chr13 52647836 52705909
view SULF1 147 35 65 39 0 0 0.570 0.136 0.252 0.151 0.000 0.000 chr8 69487847 69665912
view SULF2 181 56 53 32 0 0 0.702 0.217 0.205 0.124 0.000 0.000 chr20 47652406 47790481
view SULT1A1 215 73 37 29 4 2 0.833 0.283 0.143 0.112 0.016 0.008 chr16 28600258 28615044
view SULT1A2 208 66 41 32 1 0 0.806 0.256 0.159 0.124 0.004 0.000 chr16 28586943 28602050
view SULT1A3 77 19 84 55 70 9 0.298 0.074 0.326 0.213 0.271 0.035 chr16 30194255 30209310
view SULT1A4 87 25 83 56 58 2 0.337 0.097 0.322 0.217 0.225 0.008 chr16 29454913 29469966
view SULT1B1 203 74 47 23 0 0 0.787 0.287 0.182 0.089 0.000 0.000 chr4 69716167 69765620
view SULT1C2 170 42 81 57 0 0 0.659 0.163 0.314 0.221 0.000 0.000 chr2 108283895 108314915
view SULT1C3 187 58 61 40 0 0 0.725 0.225 0.236 0.155 0.000 0.000 chr2 108234968 108265886
view SULT1C4 162 45 93 58 1 1 0.628 0.174 0.360 0.225 0.004 0.004 chr2 108372954 108393989
view SULT1E1 222 87 31 14 0 0 0.860 0.337 0.120 0.054 0.000 0.000 chr4 69836212 69865145
view SULT2A1 215 78 38 24 0 0 0.833 0.302 0.147 0.093 0.000 0.000 chr19 47865467 47891315