Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view STK32B 84 15 75 43 0 0 0.326 0.058 0.291 0.167 0.000 0.000 chr4 5046480 5505989
view STK32C 183 46 38 29 0 0 0.709 0.178 0.147 0.112 0.000 0.000 chr10 132202492 132312950
view STK33 166 62 60 30 0 0 0.643 0.240 0.233 0.116 0.000 0.000 chr11 8386870 8599228
view STK35 135 30 99 58 0 0 0.523 0.116 0.384 0.225 0.000 0.000 chr20 2096827 2153555
view STK36 139 33 101 58 0 0 0.539 0.128 0.391 0.225 0.000 0.000 chr2 218667086 218707715
view STK38L 186 72 52 27 0 0 0.721 0.279 0.202 0.105 0.000 0.000 chr12 27239286 27330959
view STK38 198 69 53 34 0 0 0.767 0.267 0.205 0.132 0.000 0.000 chr6 36488892 36552479
view STK39 134 44 62 34 0 0 0.519 0.171 0.240 0.132 0.000 0.000 chr2 167949022 168252595
view STK3 84 20 114 58 0 0 0.326 0.078 0.442 0.225 0.000 0.000 chr8 98449633 98830688
view STK40 174 46 62 43 0 0 0.674 0.178 0.240 0.167 0.000 0.000 chr1 36334628 36390924
view STK4 163 54 72 39 0 0 0.632 0.209 0.279 0.151 0.000 0.000 chr20 44961512 45085021
view STKLD1 177 50 63 42 0 0 0.686 0.194 0.244 0.163 0.000 0.000 chr9 133371366 133411096
view STMN1 190 67 64 35 1 0 0.736 0.260 0.248 0.136 0.004 0.000 chr1 25895116 25911419
view STMN2 200 67 37 21 0 0 0.775 0.260 0.143 0.081 0.000 0.000 chr8 79606117 79671158
view STMN3 193 53 55 42 1 1 0.748 0.205 0.213 0.163 0.004 0.004 chr20 63634712 63658424
view STMN4 216 76 39 27 0 0 0.837 0.295 0.151 0.105 0.000 0.000 chr8 27230308 27263404
view STMND1 213 75 35 21 0 0 0.826 0.291 0.136 0.081 0.000 0.000 chr6 17097050 17136378
view STMP1 195 66 56 36 0 0 0.756 0.256 0.217 0.140 0.000 0.000 chr7 135657514 135681416
view STN1 190 66 56 33 0 0 0.736 0.256 0.217 0.128 0.000 0.000 chr10 103872569 103923184
view STOML1 211 72 43 30 0 0 0.818 0.279 0.167 0.116 0.000 0.000 chr15 73973926 73997295
view STOML2 213 82 42 22 2 0 0.826 0.318 0.163 0.085 0.008 0.000 chr9 35094778 35108131
view STOML3 197 61 51 34 0 0 0.764 0.236 0.198 0.132 0.000 0.000 chr13 38960925 38995831
view STOM 192 64 53 31 0 0 0.744 0.248 0.205 0.120 0.000 0.000 chr9 121333987 121375250
view STON1 187 54 51 34 0 0 0.725 0.209 0.198 0.132 0.000 0.000 chr2 48525154 48603513
view STON2 131 31 78 48 0 0 0.508 0.120 0.302 0.186 0.000 0.000 chr14 81255652 81405324
view STOX1 155 46 78 42 0 0 0.601 0.178 0.302 0.163 0.000 0.000 chr10 68822531 68898060
view STOX2 158 39 53 37 0 0 0.612 0.151 0.205 0.143 0.000 0.000 chr4 183900307 184028526
view STPG1 178 53 55 34 0 0 0.690 0.205 0.213 0.132 0.000 0.000 chr1 24351999 24418782
view STPG2 132 36 82 48 0 0 0.512 0.140 0.318 0.186 0.000 0.000 chr4 97553872 98148476
view STPG3 201 65 51 35 0 0 0.779 0.252 0.198 0.136 0.000 0.000 chr9 137246286 137258483
view STPG4 175 54 60 39 0 0 0.678 0.209 0.233 0.151 0.000 0.000 chr2 47081991 47160308
view STRA6 179 60 65 36 0 0 0.694 0.233 0.252 0.140 0.000 0.000 chr15 74174466 74207787
view STRA8 207 73 38 23 0 0 0.802 0.283 0.147 0.089 0.000 0.000 chr7 135228838 135263663
view STRADA 161 51 85 45 0 0 0.624 0.198 0.329 0.174 0.000 0.000 chr17 63697832 63746799
view STRADB 192 73 57 28 0 0 0.744 0.283 0.221 0.109 0.000 0.000 chr2 201446740 201485846
view STRAP 177 67 73 34 0 0 0.686 0.260 0.283 0.132 0.000 0.000 chr12 15877387 15908478
view STRBP 117 34 108 59 0 0 0.453 0.132 0.419 0.229 0.000 0.000 chr9 123116617 123273586
view STRC 186 60 64 40 0 0 0.721 0.233 0.248 0.155 0.000 0.000 chr15 43594563 43623800
view STRIP1 202 67 53 37 0 0 0.783 0.260 0.205 0.143 0.000 0.000 chr1 110029624 110059641
view STRIP2 172 52 69 40 0 0 0.667 0.202 0.267 0.155 0.000 0.000 chr7 129429432 129493399
view STRIT1 221 89 36 16 1 0 0.857 0.345 0.140 0.062 0.004 0.000 chr3 155285227 155298683
view STRN3 181 66 59 28 0 0 0.702 0.256 0.229 0.109 0.000 0.000 chr14 30888804 31031379
view STRN4 200 64 52 36 0 0 0.775 0.248 0.202 0.140 0.000 0.000 chr19 46714511 46751450
view STRN 150 44 89 55 0 0 0.581 0.171 0.345 0.213 0.000 0.000 chr2 36832698 36971536
view STS 55 17 180 73 0 0 0.213 0.066 0.698 0.283 0.000 0.000 chrX 7142712 7359641
view STT3A 179 58 63 34 0 0 0.694 0.225 0.244 0.132 0.000 0.000 chr11 125587852 125628091
view STT3B 170 68 76 31 0 0 0.659 0.264 0.295 0.120 0.000 0.000 chr3 31527925 31642616
view STUB1 177 55 75 45 0 0 0.686 0.213 0.291 0.174 0.000 0.000 chr16 675410 687801
view STUM 200 74 41 24 0 0 0.775 0.287 0.159 0.093 0.000 0.000 chr1 226543764 226614230
view STX10 163 33 92 70 0 0 0.632 0.128 0.357 0.271 0.000 0.000 chr19 13139058 13155375