view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AKNAD1_chr1_108810901_108862094 | 108825266 | AAGATGAT others(4064): Show |
A | exon_loss_variant others(4): Show |
HIGH | HG00558.hp1 HG01070.hp1 HG01074.hp2 others(29): Show |
a0004a0025 | a0004c0004a0004c0008a0004c0036others(2): Show | a0004c0004t0001a0004c0008t0001a0004c0008t0002others(3): Show | a0004c0004t0001g0020 a0004c0004t0001g0031 a0004c0004t0001g0034 others(23): Show |
32 | 396 | 0.0808 | -4071 | c.183 others(19): Show |
AKNAD1 | ENSG00000162641.20 | transcript | ENST00000370001.8 | protein_coding | 11/16 | chr1 | TogoVar | |||||||
ALDH3B2_chr11_67657155_67679623 | 67674435 | A | C | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(369): Show |
a0001a0002a0004others(15): Show | a0001c0001a0001c0007a0001c0009others(23): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(37): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(173): Show |
372 | 388 | 0.9588 | 0 | c.-24 others(6): Show |
ALDH3B2 | ENSG00000132746.16 | transcript | ENST00000673966.2 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
ANLN_chr7_36384862_36458791 | 36425997 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp2 HG00597.hp1 others(61): Show |
a0001a0004 | a0001c0001a0004c0007 | a0001c0001t0001a0001c0001t0010a0004c0007t0001 | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0020 others(55): Show |
64 | 396 | 0.1616 | 1 | c.274 others(7): Show |
ANLN | ENSG00000011426.11 | transcript | ENST00000265748.7 | protein_coding | 18/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
APOL4_chr22_36184128_36206809 | 36191797 | ACT | A | frameshift_variant | HIGH | HG00140.hp1 HG00323.hp2 HG00621.hp2 others(126): Show |
a0002 | a0002c0002a0002c0003a0002c0005others(2): Show | a0002c0002t0002a0002c0002t0023a0002c0002t0029others(13): Show | a0002c0002t0002g0008 a0002c0002t0002g0010 a0002c0002t0002g0011 others(63): Show |
129 | 432 | 0.2986 | -2 | c.323 others(9): Show |
p.Glu others(5): Show |
APOL4 | ENSG00000100336.18 | transcript | ENST00000683024.1 | protein_coding | 4/4 | 399/3069 | 323/1047 | 108/348 | chr22 | TogoVar | |||
APOL4_chr22_36184128_36206809 | 36201698 | A | C | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00639.hp1 HG00642.hp1 others(55): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0002c0003others(6): Show | a0001c0001t0001a0001c0001t0028a0002c0002t0002others(10): Show | a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0055 others(27): Show |
58 | 432 | 0.1343 | 0 | c.35+ others(4): Show |
APOL4 | ENSG00000100336.18 | transcript | ENST00000683024.1 | protein_coding | 1/3 | chr22 | TogoVar | |||||||
APOL5_chr22_35712872_35734483 | 35726647 | AAGCAATT others(7): Show |
A | frameshift_variant | HIGH | NA19075.hp1 | a0012 | a0012c0016 | a0012c0016t0001 | a0012c0016t0001g0001 | 1 | 400 | 0.0025 | -14 | c.581 others(21): Show |
p.Ser others(5): Show |
APOL5 | ENSG00000128313.2 | transcript | ENST00000249044.2 | protein_coding | 3/5 | 581/1438 | 581/1302 | 194/433 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||
APOL5_chr22_35712872_35734483 | 35726762 | A | T | stop_gained | HIGH | NA19075.hp1 | a0012 | a0012c0016 | a0012c0016t0001 | a0012c0016t0001g0001 | 1 | 400 | 0.0025 | 0 | c.694 others(3): Show |
p.Lys others(4): Show |
APOL5 | ENSG00000128313.2 | transcript | ENST00000249044.2 | protein_coding | 3/5 | 694/1438 | 694/1302 | 232/433 | chr22 | TogoVar | |||
ASAH2B_chr10_50734936_50764255 | 50745132 | T | C | start_lost | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(343): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(53): Show | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0010 others(131): Show |
346 | 412 | 0.8398 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
ASAH2B | ENSG00000204147.11 | transcript | ENST00000647317.2 | protein_coding | 3/6 | 149/5145 | 2/483 | 1/160 | chr10 | TogoVar | |||
ATM_chr11_108218067_108374102 | 108250683 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(156): Show |
a0001a0003a0004others(8): Show | a0001c0001a0001c0008a0001c0010others(13): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0010others(31): Show | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(155): Show |
159 | 299 | 0.5318 | 1 | c.123 others(7): Show |
ATM | ENSG00000149311.21 | transcript | ENST00000675843.1 | protein_coding | 9/62 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ATP4A_chr19_35545031_35568658 | 35563432 | A | AC | frameshift_variant | HIGH | HG01175.hp2 HG01346.hp2 HG01952.hp1 others(8): Show |
a0003 | a0003c0006a0003c0011a0003c0016others(3): Show | a0003c0006t0001a0003c0011t0002a0003c0016t0001others(3): Show | a0003c0006t0001g0071 a0003c0006t0001g0073 a0003c0006t0001g0074 others(7): Show |
11 | 424 | 0.0259 | 1 | c.107 others(4): Show |
p.Gly others(4): Show |
ATP4A | ENSG00000105675.9 | transcript | ENST00000262623.4 | protein_coding | 2/22 | 136/3721 | 107/3108 | 36/1035 | chr19 | TogoVar | |||
BLVRA_chr7_43753680_43812342 | 43792713 | A | G | splice_acceptor_variant others(1): Show |
HIGH | NA19075.hp2 | a0008 | a0008c0013 | a0008c0013t0001 | a0008c0013t0001g0260 | 1 | 412 | 0.0024 | 0 | c.255 others(5): Show |
BLVRA | ENSG00000106605.11 | transcript | ENST00000265523.9 | protein_coding | 4/7 | chr7 | TogoVar | |||||||
C14orf28_chr14_44892275_44912257 | 44900759 | G | A | stop_gained | HIGH | NA19075.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0001 | 1 | 336 | 0.0030 | 0 | c.324 others(3): Show |
p.Trp others(4): Show |
C14orf28 | ENSG00000179476.8 | transcript | ENST00000325192.8 | protein_coding | 2/5 | 619/2935 | 324/933 | 108/310 | chr14 | TogoVar | |||
C14orf28_chr14_44892275_44912257 | 44900764 | G | A | stop_gained | HIGH | NA19075.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0001 | 1 | 336 | 0.0030 | 0 | c.329 others(3): Show |
p.Trp others(4): Show |
C14orf28 | ENSG00000179476.8 | transcript | ENST00000325192.8 | protein_coding | 2/5 | 624/2935 | 329/933 | 110/310 | chr14 | TogoVar | |||
C14orf28_chr14_44892275_44912257 | 44900765 | G | A | stop_gained | HIGH | NA19075.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0001 | 1 | 336 | 0.0030 | 0 | c.330 others(3): Show |
p.Trp others(4): Show |
C14orf28 | ENSG00000179476.8 | transcript | ENST00000325192.8 | protein_coding | 2/5 | 625/2935 | 330/933 | 110/310 | chr14 | TogoVar | |||
C14orf28_chr14_44892275_44912257 | 44900775 | G | T | stop_gained | HIGH | NA19075.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0001 | 1 | 336 | 0.0030 | 0 | c.340 others(3): Show |
p.Glu others(4): Show |
C14orf28 | ENSG00000179476.8 | transcript | ENST00000325192.8 | protein_coding | 2/5 | 635/2935 | 340/933 | 114/310 | chr14 | TogoVar | |||
C14orf28_chr14_44892275_44912257 | 44900900 | T | A | stop_gained | HIGH | NA19075.hp1 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0001 | 1 | 336 | 0.0030 | 0 | c.465 others(3): Show |
p.Cys others(4): Show |
C14orf28 | ENSG00000179476.8 | transcript | ENST00000325192.8 | protein_coding | 2/5 | 760/2935 | 465/933 | 155/310 | chr14 | TogoVar | |||
CBX4_chr17_79828156_79844440 | 79834128 | A | AC | frameshift_variant | HIGH | HG00438.hp1 HG00558.hp1 HG01099.hp2 others(31): Show |
a0002a0008 | a0002c0002a0002c0009a0008c0013 | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(5): Show | a0002c0002t0001g0023 a0002c0002t0001g0035 a0002c0002t0001g0042 others(21): Show |
34 | 416 | 0.0817 | 1 | c.151 others(5): Show |
p.Val others(5): Show |
CBX4 | ENSG00000141582.15 | transcript | ENST00000269397.9 | protein_coding | 5/5 | 1702/2675 | 1513/1683 | 505/560 | chr17 | TogoVar | |||
CCDC195_chr2_224698764_224721365 | 224716143 | G | A | stop_gained | HIGH | NA18970.hp2 NA18997.hp1 NA19075.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0019 | 3 | 410 | 0.0073 | 0 | c.223 others(3): Show |
p.Gln others(3): Show |
CCDC195 | ENSG00000283428.1 | transcript | ENST00000638102.1 | protein_coding | 1/3 | 223/606 | 223/606 | 75/201 | chr2 | TogoVar | |||
CCL20_chr2_227808842_227822556 | 227815437 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG02055.hp2 HG02145.hp1 HG02258.hp2 others(27): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0003a0003c0005t0001 | a0001c0001t0001g0004 a0001c0001t0001g0014 a0001c0001t0001g0031 others(4): Show |
30 | 438 | 0.0685 | 1 | c.77- others(5): Show |
CCL20 | ENSG00000115009.13 | transcript | ENST00000358813.5 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CD9_chr12_6195400_6243266 | 6233438 | C | CGCCATTG others(18): Show |
frameshift_variant others(1): Show |
HIGH | NA19075.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0146 | 1 | 376 | 0.0027 | 25 | c.302 others(32): Show |
p.Trp others(5): Show |
CD9 | ENSG00000010278.15 | transcript | ENST00000009180.10 | protein_coding | 4/8 | 427/1225 | 327/687 | 109/228 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||
CER1_chr9_14714724_14727733 | 14720210 | GGAGGAAA others(40): Show |
G | frameshift_variant | HIGH | NA19075.hp2 | a0006 | a0006c0010 | a0006c0010t0003 | a0006c0010t0003g0026 | 1 | 458 | 0.0022 | -47 | c.637 others(54): Show |
p.Lys others(5): Show |
CER1 | ENSG00000147869.5 | transcript | ENST00000380911.4 | protein_coding | 2/2 | 744/1231 | 637/804 | 213/267 | chr9 | TogoVar | |||
CFAP45_chr1_159867364_159905165 | 159873104 | G | A | stop_gained | HIGH | NA19075.hp1 | a0016 | a0016c0016 | a0016c0016t0001 | a0016c0016t0001g0254 | 1 | 408 | 0.0025 | 0 | c.141 others(4): Show |
p.Gln others(4): Show |
CFAP45 | ENSG00000213085.10 | transcript | ENST00000368099.9 | protein_coding | 11/12 | 1484/1844 | 1417/1656 | 473/551 | chr1 | TogoVar | |||
CHIT1_chr1_203211079_203234673 | 203217822 | C | CAGACCAT others(17): Show |
stop_gained others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(172): Show |
a0001a0009a0014others(5): Show | a0001c0001a0001c0022a0001c0025others(8): Show | a0001c0001t0001a0001c0001t0004a0001c0022t0001others(9): Show | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(41): Show |
175 | 482 | 0.3631 | 24 | c.104 others(33): Show |
p.Val others(37): Show |
CHIT1 | ENSG00000133063.16 | transcript | ENST00000367229.6 | protein_coding | 10/11 | 1109/2248 | 1072/1401 | 358/466 | chr1 | TogoVar | |||
CHRFAM7A_chr15_30355566_30398540 | 30373077 | TCA | T | frameshift_variant | HIGH | HG00423.hp1 HG00423.hp2 HG00438.hp1 others(50): Show |
a0001 | a0001c0001a0001c0007a0001c0018others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(9): Show | a0001c0001t0001g0004 a0001c0001t0001g0044 a0001c0001t0001g0047 others(49): Show |
53 | 132 | 0.4015 | -2 | c.227 others(9): Show |
p.Leu others(4): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 6/10 | 673/3411 | 227/1239 | 76/412 | chr15 | TogoVar | |||
CLDN5_chr22_19518027_19529410 | 19523812 | G | C | stop_gained | HIGH | NA19075.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0000 | 1 | 440 | 0.0023 | 0 | c.444 others(3): Show |
p.Tyr others(4): Show |
CLDN5 | ENSG00000184113.10 | transcript | ENST00000618236.2 | protein_coding | 1/1 | 599/1384 | 444/657 | 148/218 | chr22 | TogoVar | |||
CNDP2_chr18_74491363_74528454 | 74518940 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(351): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0003a0001c0005others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(56): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(247): Show |
354 | 422 | 0.8389 | 1 | c.121 others(7): Show |
CNDP2 | ENSG00000133313.15 | transcript | ENST00000324262.9 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
COG6_chr13_39650662_39757628 | 39679963 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(131): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(119): Show |
134 | 368 | 0.3641 | 1 | c.624 others(6): Show |
COG6 | ENSG00000133103.17 | transcript | ENST00000455146.8 | protein_coding | 6/18 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COQ6_chr14_73945302_73968670 | 73958272 | TTGTTGGT others(9): Show |
T | frameshift_variant others(3): Show |
HIGH | NA19075.hp2 | a0009 | a0009c0010 | a0009c0010t0001 | a0009c0010t0001g0074 | 1 | 454 | 0.0022 | -16 | c.609 others(26): Show |
p.Leu others(5): Show |
COQ6 | ENSG00000119723.17 | transcript | ENST00000334571.7 | protein_coding | 5/12 | 640/2109 | 609/1407 | 203/468 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||
CSNKA2IP_chr3_88333456_88472594 | 88467516 | G | A | stop_gained | HIGH | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(239): Show |
a0001a0005a0007others(8): Show | a0001c0001a0001c0004a0001c0012others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(14): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0019 others(233): Show |
242 | 384 | 0.6302 | 0 | c.215 others(4): Show |
p.Trp others(4): Show |
CSNKA2IP | ENSG00000283434.2 | transcript | ENST00000637986.2 | protein_coding | 2/2 | 2617/2695 | 2159/2205 | 720/734 | chr3 | TogoVar | |||
CYLC2_chr9_102990333_103023488 | 103016962 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(408): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0005a0002c0002others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(62): Show | a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0016 others(258): Show |
411 | 446 | 0.9215 | 0 | c.*89 others(6): Show |
CYLC2 | ENSG00000155833.15 | transcript | ENST00000374798.8 | protein_coding | 7/7 | chr9 | TogoVar | |||||||
DEFA4_chr8_6930820_6943306 | 6936727 | C | A | splice_donor_variant others(1): Show |
HIGH | HG02015.hp2 HG02074.hp1 NA18960.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 18 | 484 | 0.0372 | 0 | c.172 others(5): Show |
DEFA4 | ENSG00000164821.5 | transcript | ENST00000297435.3 | protein_coding | 2/2 | chr8 | TogoVar | |||||||
DFFA_chr1_10451522_10477529 | 10472433 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00423.hp1 HG00423.hp2 others(192): Show |
a0002 | a0002c0002a0002c0004a0002c0006others(5): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(57): Show | a0002c0002t0001g0001 a0002c0002t0001g0004 a0002c0002t0001g0008 others(124): Show |
195 | 436 | 0.4472 | 1 | c.25d others(3): Show |
p.Val others(3): Show |
DFFA | ENSG00000160049.12 | transcript | ENST00000377038.8 | protein_coding | 1/6 | 96/6035 | 25/996 | 9/331 | chr1 | TogoVar | |||
DRD4_chr11_632269_645706 | 639791 | A | AC | frameshift_variant | HIGH | HG00544.hp1 HG00642.hp2 HG01109.hp2 others(10): Show |
a0004a0014 | a0004c0005a0004c0007a0004c0034others(1): Show | a0004c0005t0001a0004c0005t0002a0004c0007t0001others(2): Show | a0004c0005t0001g0001 a0004c0005t0001g0003 a0004c0005t0001g0005 others(7): Show |
13 | 420 | 0.0310 | 1 | c.546 others(4): Show |
p.Ala others(5): Show |
DRD4 | ENSG00000069696.7 | transcript | ENST00000176183.6 | protein_coding | 3/4 | 583/1399 | 547/1260 | 183/419 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||
DZANK1_chr20_18378367_18472030 | 18412855 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(209): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0007a0001c0015others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0287 a0001c0001t0001g0294 a0001c0001t0001g0332 others(194): Show |
212 | 372 | 0.5699 | 0 | c.130 others(6): Show |
DZANK1 | ENSG00000089091.17 | transcript | ENST00000699568.1 | protein_coding | 12/20 | chr20 | TogoVar | |||||||
EBLN2_chr3_73056659_73068337 | 73062330 | C | CA | frameshift_variant | HIGH | HG00099.hp1 HG00423.hp2 HG00597.hp1 others(111): Show |
a0002a0005 | a0002c0002a0002c0007a0002c0009others(1): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0009others(8): Show | a0002c0002t0002g0000 a0002c0002t0003g0000 a0002c0002t0009g0000 others(8): Show |
114 | 426 | 0.2676 | 1 | c.250 others(4): Show |
p.Arg others(4): Show |
EBLN2 | ENSG00000255423.1 | transcript | ENST00000533473.1 | protein_coding | 1/1 | 674/1679 | 251/819 | 84/272 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||
EFCAB13_chr17_47318955_47446312 | 47347921 | C | T | stop_gained | HIGH | HG00408.hp2 HG00423.hp1 HG00438.hp1 others(25): Show |
a0005a0011 | a0005c0005a0011c0027 | a0005c0005t0001a0005c0005t0002a0005c0005t0003others(2): Show | a0005c0005t0001g0007 a0005c0005t0001g0008 a0005c0005t0001g0068 others(25): Show |
28 | 354 | 0.0791 | 0 | c.631 others(3): Show |
p.Arg others(4): Show |
EFCAB13 | ENSG00000178852.16 | transcript | ENST00000331493.7 | protein_coding | 9/25 | 1068/3957 | 631/2922 | 211/973 | chr17 | TogoVar | |||
FAM149B1_chr10_73163119_73249504 | 73168308 | T | TGAG | start_lost others(1): Show |
HIGH | HG00735.hp1 HG01243.hp1 HG01891.hp1 others(16): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0008c0006 | a0001c0001t0003a0001c0001t0006a0001c0001t0015others(2): Show | a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0003g0217 others(16): Show |
19 | 232 | 0.0819 | 3 | c.-2_ others(7): Show |
FAM149B1 | ENSG00000138286.15 | transcript | ENST00000242505.11 | protein_coding | 1/14 | 223/5455 | 2/1749 | 1/582 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||
FIG4_chr6_109686296_109830426 | 109732621 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00323.hp2 HG00408.hp2 others(275): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(13): Show | a0001c0001t0002a0001c0001t0003a0001c0003t0001others(20): Show | a0001c0001t0002g0019 a0001c0001t0002g0021 a0001c0001t0002g0122 others(271): Show |
278 | 365 | 0.7616 | 1 | c.447 others(6): Show |
FIG4 | ENSG00000112367.12 | transcript | ENST00000230124.8 | protein_coding | 4/22 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
FLG2_chr1_152343735_152365006 | 152350656 | G | T | stop_gained | HIGH | HG00323.hp2 HG00423.hp2 HG00597.hp2 others(152): Show |
a0003a0004a0005others(9): Show | a0003c0002a0003c0042a0003c0043others(12): Show | a0003c0002t0002a0003c0002t0012a0003c0002t0019others(16): Show | a0003c0002t0002g0002 a0003c0002t0002g0072 a0003c0002t0002g0074 others(20): Show |
155 | 420 | 0.3690 | 0 | c.713 others(4): Show |
p.Ser others(5): Show |
FLG2 | ENSG00000143520.6 | transcript | ENST00000388718.5 | protein_coding | 3/3 | 7203/9124 | 7130/7176 | 2377/2391 | chr1 | TogoVar | |||
FMO2_chr1_171180300_171217686 | 171208951 | C | T | stop_gained | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(345): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0015a0002c0002others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(30): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(165): Show |
348 | 364 | 0.9560 | 0 | c.141 others(4): Show |
p.Gln others(4): Show |
FMO2 | ENSG00000094963.14 | transcript | ENST00000209929.10 | protein_coding | 9/9 | 1480/5215 | 1414/1608 | 472/535 | chr1 | TogoVar | |||
FMO2_chr1_171180300_171217686 | 171209118 | C | CT | frameshift_variant | HIGH | HG00140.hp2 HG00544.hp2 HG00741.hp2 others(78): Show |
a0002a0004 | a0002c0002a0002c0019a0004c0009 | a0002c0002t0004a0002c0002t0005a0002c0002t0025others(2): Show | a0002c0002t0004g0003 a0002c0002t0004g0008 a0002c0002t0004g0009 others(34): Show |
81 | 364 | 0.2225 | 1 | c.158 others(5): Show |
p.Cys others(5): Show |
FMO2 | ENSG00000094963.14 | transcript | ENST00000209929.10 | protein_coding | 9/9 | 1655/5215 | 1589/1608 | 530/535 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||
FOLR3_chr11_72130725_72144892 | 72139110 | CTA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(332): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 others(24): Show |
335 | 382 | 0.8770 | -2 | c.320 others(9): Show |
p.Tyr others(5): Show |
FOLR3 | ENSG00000110203.10 | transcript | ENST00000611028.3 | protein_coding | 3/5 | 370/849 | 320/738 | 107/245 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||
FSCB_chr14_44499149_44512283 | 44504951 | A | AGGGGCCT others(30): Show |
frameshift_variant others(1): Show |
HIGH | NA19075.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0000 | 1 | 220 | 0.0045 | 37 | c.203 others(46): Show |
p.Ala others(5): Show |
FSCB | ENSG00000189139.6 | transcript | ENST00000340446.5 | protein_coding | 1/1 | 2332/3135 | 2036/2478 | 679/825 | chr14 | TogoVar | |||
GCNA_chrX_71573437_71618583 | 71603835 | GGATGTTC others(10): Show |
G | frameshift_variant | HIGH | NA19075.hp1 | a0011 | a0011c0010 | a0011c0010t0001 | a0011c0010t0001g0070 | 1 | 263 | 0.0038 | -17 | c.559 others(24): Show |
p.Asp others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 647/2765 | 559/2076 | 187/691 | chrX | TogoVar | |||
GMPR_chr6_16233587_16300549 | 16295116 | A | AACTC | frameshift_variant | HIGH | NA18945.hp2 NA18971.hp1 NA19075.hp1 others(2): Show |
a0003a0007 | a0003c0005a0007c0011 | a0003c0005t0002a0007c0011t0002 | a0003c0005t0002g0153 a0003c0005t0002g0158 a0003c0005t0002g0181 others(2): Show |
5 | 342 | 0.0146 | 4 | c.970 others(11): Show |
p.Lys others(5): Show |
GMPR | ENSG00000137198.10 | transcript | ENST00000259727.5 | protein_coding | 9/9 | 1081/1508 | 974/1038 | 325/345 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||
GOLGA6L6_chr15_20526856_20546800 | 20535014 | C | A | stop_gained | HIGH | HG00408.hp1 HG00609.hp1 HG00735.hp1 others(91): Show |
a0001a0007a0010others(10): Show | a0001c0001a0001c0010a0001c0031others(19): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0012others(27): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0014 others(47): Show |
94 | 212 | 0.4434 | 0 | c.142 others(4): Show |
p.Glu others(4): Show |
GOLGA6L6 | ENSG00000277322.1 | transcript | ENST00000619213.1 | protein_coding | 8/9 | 1511/4013 | 1420/2175 | 474/724 | chr15 | TogoVar | |||
GOLGA8S_chr15_23349748_23373341 | 23364403 | G | T | stop_gained | HIGH | HG00280.hp1 HG00438.hp1 HG00544.hp1 others(75): Show |
a0002a0012a0016others(17): Show | a0002c0002a0002c0086a0002c0087others(23): Show | a0002c0002t0001a0002c0002t0020a0002c0086t0001others(24): Show | a0002c0002t0001g0004 a0002c0002t0001g0008 a0002c0002t0001g0018 others(60): Show |
78 | 428 | 0.1822 | 0 | c.144 others(4): Show |
p.Glu others(4): Show |
GOLGA8S | ENSG00000261739.3 | transcript | ENST00000562295.3 | protein_coding | 16/19 | 1509/5186 | 1447/1917 | 483/638 | chr15 | TogoVar | |||
GP6_chr19_55008705_55043264 | 55014735 | G | GCAGA | frameshift_variant | HIGH | HG00423.hp2 HG00438.hp2 HG00621.hp1 others(55): Show |
a0003 | a0003c0003a0003c0016a0003c0019others(1): Show | a0003c0003t0003a0003c0016t0003a0003c0019t0003others(1): Show | a0003c0003t0003g0002 a0003c0003t0003g0003 a0003c0003t0003g0009 others(48): Show |
58 | 440 | 0.1318 | 4 | c.120 others(13): Show |
p.Pro others(5): Show |
GP6 | ENSG00000088053.11 | transcript | ENST00000310373.7 | protein_coding | 8/8 | 1237/2268 | 1209/1863 | 403/620 | chr19 | TogoVar | |||
GPR33_chr14_31477875_31493039 | 31483548 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(422): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(81): Show |
425 | 446 | 0.9529 | 0 | c.418 others(3): Show |
p.Arg others(4): Show |
GPR33 | ENSG00000214943.5 | transcript | ENST00000399285.5 | protein_coding | 2/2 | 567/1240 | 418/1002 | 140/333 | chr14 | TogoVar | |||
HLA-B_chr6_31348875_31362179 | 31356366 | G | T | stop_gained | HIGH | HG00438.hp2 HG00621.hp2 HG01074.hp1 others(44): Show |
a0015a0016a0018others(6): Show | a0015c0014a0016c0029a0016c0030others(7): Show | a0015c0014t0010a0015c0014t0036a0016c0029t0010others(9): Show | a0015c0014t0010g0020 a0015c0014t0010g0063 a0015c0014t0036g0109 others(12): Show |
47 | 466 | 0.1009 | 0 | c.420 others(3): Show |
p.Tyr others(4): Show |
HLA-B | ENSG00000234745.14 | transcript | ENST00000412585.7 | protein_coding | 3/8 | 441/1536 | 420/1089 | 140/362 | chr6 | TogoVar |