regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ABCB5_chr7_20610667_20762008 | 20626612 | G | C | splice_donor_variant others(1): Show |
HIGH | HG00438.hp1 HG00558.hp1 HG00597.hp1 others(68): Show |
a0002a0003a0005others(11): Show | a0002c0003a0003c0002a0003c0010others(14): Show | a0002c0003t0001a0003c0002t0001a0003c0002t0002others(20): Show | a0002c0003t0001g0349a0003c0002t0001g0117a0003c0002t0001g0137others(68): Show | 71 | 360 | 0.1972 | 0 | c.108 others(5): Show |
ABCB5 | ENSG00000004846.17 | transcript | ENST00000404938.7 | protein_coding | 3/27 | chr7 | TogoVar | ||||||
ABHD16B_chr20_63856498_63867988 | 63862607 | A | AC | frameshift_variant | HIGH | HG00597.hp2 HG01175.hp2 HG01255.hp2 others(15): Show |
a0003a0006 | a0003c0003a0003c0016a0006c0007 | a0003c0003t0001a0003c0016t0001a0006c0007t0001 | a0003c0003t0001g0000a0003c0016t0001g0000a0006c0007t0001g0000 | 18 | 398 | 0.0452 | 1 | c.107 others(5): Show |
p.Val others(5): Show |
ABHD16B | ENSG00000183260.7 | transcript | ENST00000369916.5 | protein_coding | 1/1 | 1115/1491 | 1072/1410 | 358/469 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |
ACSM2A_chr16_20446521_20492669 | 20465682 | C | T | stop_gained | HIGH | HG00673.hp2 HG02071.hp1 HG02083.hp2 others(31): Show |
a0006 | a0006c0006a0006c0016 | a0006c0006t0002a0006c0006t0003a0006c0006t0009others(2): Show | a0006c0006t0002g0036a0006c0006t0002g0037a0006c0006t0002g0270others(28): Show | 34 | 436 | 0.0780 | 0 | c.343 others(3): Show |
p.Arg others(4): Show |
ACSM2A | ENSG00000183747.12 | transcript | ENST00000573854.6 | protein_coding | 3/14 | 512/2894 | 343/1734 | 115/577 | chr16 | TogoVar | ||
ADGRA2_chr8_37791883_37849896 | 37841784 | C | CG | frameshift_variant | HIGH | HG00408.hp2 HG00673.hp1 HG01192.hp1 others(10): Show |
a0004a0008a0015others(1): Show | a0004c0011a0004c0015a0008c0019others(4): Show | a0004c0011t0001a0004c0015t0001a0008c0019t0001others(4): Show | a0004c0011t0001g0041a0004c0011t0001g0073a0004c0011t0001g0306others(10): Show | 13 | 370 | 0.0351 | 1 | c.345 others(5): Show |
p.Ala others(6): Show |
ADGRA2 | ENSG00000020181.18 | transcript | ENST00000412232.3 | protein_coding | 19/19 | 3838/6944 | 3452/4017 | 1151/1338 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |
ADGRV1_chr5_90553797_91169437 | 90756446 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG00621.hp1 HG01167.hp1 HG01192.hp1 others(41): Show |
a0002a0005a0012others(16): Show | a0002c0001a0002c0008a0005c0006others(19): Show | a0002c0001t0001a0002c0001t0002a0002c0008t0001others(20): Show | a0002c0001t0001g0016a0002c0001t0001g0018a0002c0001t0001g0029others(41): Show | 44 | 158 | 0.2785 | 1 | c.115 others(8): Show |
ADGRV1 | ENSG00000164199.18 | transcript | ENST00000405460.9 | protein_coding | 55/89 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
AEBP1_chr7_44099345_44119560 | 44112970 | TCTGTATC others(14): Show |
T | frameshift_variant others(3): Show |
HIGH | NA19082.hp2 | a0014 | a0014c0016 | a0014c0016t0001 | a0014c0016t0001g0043 | 1 | 426 | 0.0024 | -21 | c.257 others(33): Show |
p.Thr others(5): Show |
AEBP1 | ENSG00000106624.11 | transcript | ENST00000223357.8 | protein_coding | 19/21 | 2570/3477 | 857/1158 | chr7 | TogoVar | |||
AEBP1_chr7_44099345_44119560 | 44113703 | C | CGGGGGGG others(9): Show |
frameshift_variant | HIGH | NA19082.hp2 | a0014 | a0014c0016 | a0014c0016t0001 | a0014c0016t0001g0043 | 1 | 426 | 0.0024 | 16 | c.292 others(25): Show |
p.Ala others(5): Show |
AEBP1 | ENSG00000106624.11 | transcript | ENST00000223357.8 | protein_coding | 21/21 | 3245/4097 | 2924/3477 | 975/1158 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
AGAP6_chr10_49983406_50015499 | 49988768 | A | AC | frameshift_variant | HIGH | HG00140.hp1 HG00609.hp2 HG00741.hp1 others(36): Show |
a0003 | a0003c0003a0003c0014a0003c0031 | a0003c0003t0003a0003c0003t0009a0003c0003t0010others(3): Show | a0003c0003t0003g0011a0003c0003t0003g0017a0003c0003t0003g0024others(25): Show | 39 | 406 | 0.0961 | 1 | c.55d others(3): Show |
p.Gln others(4): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 1/8 | 366/2684 | 56/2061 | 19/686 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
AGAP6_chr10_49983406_50015499 | 50008914 | CAA | C | frameshift_variant | HIGH | HG00140.hp1 HG00609.hp2 HG00741.hp1 others(36): Show |
a0003 | a0003c0003a0003c0014a0003c0031 | a0003c0003t0003a0003c0003t0009a0003c0003t0010others(3): Show | a0003c0003t0003g0011a0003c0003t0003g0017a0003c0003t0003g0024others(25): Show | 39 | 406 | 0.0961 | -2 | c.791 others(9): Show |
p.Lys others(5): Show |
AGAP6 | ENSG00000204149.16 | transcript | ENST00000412531.7 | protein_coding | 8/8 | 1101/2684 | 791/2061 | 264/686 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
ALLC_chr2_3653200_3707671 | 3681636 | A | T | stop_gained others(1): Show |
HIGH | NA19082.hp2 | a0009 | a0009c0016 | a0009c0016t0002 | a0009c0016t0002g0180 | 1 | 274 | 0.0037 | 0 | c.301 others(3): Show |
p.Lys others(4): Show |
ALLC | ENSG00000151360.10 | transcript | ENST00000252505.4 | protein_coding | 6/12 | 458/1441 | 301/1176 | 101/391 | chr2 | TogoVar | ||
AMD1_chr6_110869785_110900713 | 110892724 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(206): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(7): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(77): Show | 209 | 394 | 0.5305 | 1 | c.616 others(6): Show |
AMD1 | ENSG00000123505.19 | transcript | ENST00000368885.8 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
ANKDD1B_chr5_75606453_75676846 | 75669297 | G | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(139): Show |
a0001a0006a0007others(10): Show | a0001c0001a0001c0019a0001c0035others(13): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0017others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0009a0001c0001t0001g0010others(122): Show | 142 | 372 | 0.3817 | 0 | c.143 others(4): Show |
p.Trp others(4): Show |
ANKDD1B | ENSG00000189045.15 | transcript | ENST00000601380.4 | protein_coding | 13/14 | 1621/2575 | 1439/1587 | 480/528 | chr5 | TogoVar | ||
ANKRD30B_chr18_14743172_14859667 | 14814633 | G | GCTCTCTT others(10879): Show |
frameshift_variant others(1): Show |
HIGH | NA19082.hp2 | a0037 | a0037c0058 | a0037c0058t0002 | a0037c0058t0002g0044 | 1 | 316 | 0.0032 | 10886 | c.258 others(10895): Show |
p.Gly others(5): Show |
ANKRD30B | ENSG00000180777.15 | transcript | ENST00000690538.1 | protein_coding | 30/44 | 2830/5335 | 2582/4578 | 861/1525 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |
ANLN_chr7_36384862_36458791 | 36425997 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp2 HG00597.hp1 others(61): Show |
a0002a0004 | a0002c0001a0004c0007 | a0002c0001t0001a0002c0001t0010a0004c0007t0001 | a0002c0001t0001g0001a0002c0001t0001g0009a0002c0001t0001g0015others(58): Show | 64 | 408 | 0.1569 | 1 | c.274 others(7): Show |
ANLN | ENSG00000011426.11 | transcript | ENST00000265748.7 | protein_coding | 18/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
APOBR_chr16_28489643_28503964 | 28496129 | CCGGGACA others(19): Show |
C | frameshift_variant | HIGH | NA19082.hp1 | a0022 | a0022c0059 | a0022c0059t0001 | a0022c0059t0001g0001 | 1 | 406 | 0.0025 | -26 | c.109 others(35): Show |
p.Gly others(5): Show |
APOBR | ENSG00000184730.12 | transcript | ENST00000564831.6 | protein_coding | 2/4 | 1129/3792 | 1090/3294 | 364/1097 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
APOBR_chr16_28489643_28503964 | 28496912 | G | A | stop_gained | HIGH | NA19082.hp2 | a0031 | a0031c0034 | a0031c0034t0002 | a0031c0034t0002g0001 | 1 | 406 | 0.0025 | 0 | c.187 others(4): Show |
p.Trp others(4): Show |
APOBR | ENSG00000184730.12 | transcript | ENST00000564831.6 | protein_coding | 2/4 | 1910/3792 | 1871/3294 | 624/1097 | chr16 | TogoVar | ||
APOL4_chr22_36184128_36206809 | 36191797 | ACT | A | frameshift_variant | HIGH | HG00140.hp1 HG00323.hp2 HG00621.hp2 others(126): Show |
a0002 | a0002c0002a0002c0003a0002c0005others(2): Show | a0002c0002t0002a0002c0002t0023a0002c0002t0029others(13): Show | a0002c0002t0002g0007a0002c0002t0002g0009a0002c0002t0002g0011others(74): Show | 129 | 434 | 0.2972 | -2 | c.323 others(9): Show |
p.Glu others(5): Show |
APOL4 | ENSG00000100336.18 | transcript | ENST00000683024.1 | protein_coding | 4/4 | 399/3069 | 323/1047 | 108/348 | chr22 | TogoVar | ||
ARMS2_chr10_122449653_122462352 | 122454839 | C | T | stop_gained | HIGH | HG00099.hp1 HG00323.hp2 HG00423.hp2 others(58): Show |
a0003 | a0003c0003 | a0003c0003t0001a0003c0003t0002a0003c0003t0004others(2): Show | a0003c0003t0001g0003a0003c0003t0001g0016a0003c0003t0001g0018others(4): Show | 61 | 424 | 0.1439 | 0 | c.112 others(3): Show |
p.Arg others(3): Show |
ARMS2 | ENSG00000254636.1 | transcript | ENST00000528446.1 | protein_coding | 1/2 | 187/818 | 112/324 | 38/107 | chr10 | TogoVar | ||
ARX_chrX_24998694_25020965 | 25013028 | GC | G | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0015 | a0004c0005t0015g0038 | 1 | 300 | 0.0033 | -1 | c.966 others(4): Show |
p.Leu others(5): Show |
ARX | ENSG00000004848.8 | transcript | ENST00000379044.5 | protein_coding | 2/5 | 1194/2893 | 966/1689 | 322/562 | chrX | TogoVar | ||
ARX_chrX_24998694_25020965 | 25013132 | TC | T | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0015 | a0004c0005t0015g0038 | 1 | 300 | 0.0033 | -1 | c.862 others(4): Show |
p.Glu others(5): Show |
ARX | ENSG00000004848.8 | transcript | ENST00000379044.5 | protein_coding | 2/5 | 1090/2893 | 862/1689 | 288/562 | chrX | TogoVar | ||
ARX_chrX_24998694_25020965 | 25013578 | C | CG | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0015 | a0004c0005t0015g0038 | 1 | 300 | 0.0033 | 1 | c.416 others(4): Show |
p.Asp others(5): Show |
ARX | ENSG00000004848.8 | transcript | ENST00000379044.5 | protein_coding | 2/5 | 644/2893 | 416/1689 | 139/562 | chrX | TogoVar | ||
ARX_chrX_24998694_25020965 | 25013613 | G | GC | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0015 | a0004c0005t0015g0038 | 1 | 300 | 0.0033 | 1 | c.381 others(4): Show |
p.Pro others(5): Show |
ARX | ENSG00000004848.8 | transcript | ENST00000379044.5 | protein_coding | 2/5 | 609/2893 | 381/1689 | 127/562 | chrX | TogoVar | ||
ARX_chrX_24998694_25020965 | 25013773 | CG | C | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0015 | a0004c0005t0015g0038 | 1 | 300 | 0.0033 | -1 | c.221 others(4): Show |
p.Pro others(4): Show |
ARX | ENSG00000004848.8 | transcript | ENST00000379044.5 | protein_coding | 2/5 | 449/2893 | 221/1689 | 74/562 | chrX | TogoVar | ||
AS3MT_chr10_102864470_102906899 | 102869497 | TCCTGAGT others(29): Show |
T | frameshift_variant others(2): Show |
HIGH | HG00099.hp1 HG00544.hp1 HG00597.hp1 others(170): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(28): Show | a0001c0001t0002g0002a0001c0001t0002g0003a0001c0001t0002g0007others(163): Show | 173 | 362 | 0.4779 | -36 | c.-19 others(44): Show |
p.Met others(3): Show |
AS3MT | ENSG00000214435.9 | transcript | ENST00000369880.8 | protein_coding | 1/11 | 105/2450 | 1/1128 | 1/375 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
ASAH2B_chr10_50734936_50764255 | 50745132 | T | C | start_lost | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(344): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(59): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0010others(135): Show | 347 | 414 | 0.8382 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
ASAH2B | ENSG00000204147.11 | transcript | ENST00000647317.2 | protein_coding | 3/6 | 149/5145 | 2/483 | 1/160 | chr10 | TogoVar | ||
ASMT_chrX_1610059_1648081 | 1624388 | G | GA | frameshift_variant | HIGH | NA19082.hp1 | a0012 | a0012c0007 | a0012c0007t0001 | a0012c0007t0001g0036 | 1 | 223 | 0.0045 | 1 | c.365 others(4): Show |
p.Asp others(5): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 3/9 | 507/1330 | 366/1122 | 122/373 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ATP6V1B1_chr2_70930900_70970431 | 70935956 | T | C | start_lost | HIGH | HG00140.hp2 HG00323.hp2 HG00408.hp1 others(149): Show |
a0002a0004a0005others(4): Show | a0002c0003a0002c0006a0002c0008others(18): Show | a0002c0003t0001a0002c0006t0001a0002c0006t0003others(21): Show | a0002c0003t0001g0021a0002c0003t0001g0271a0002c0003t0001g0280others(144): Show | 152 | 440 | 0.3455 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
ATP6V1B1 | ENSG00000116039.13 | transcript | ENST00000234396.10 | protein_coding | 1/14 | 57/1907 | 2/1542 | 1/513 | chr2 | TogoVar | ||
ATP7B_chr13_51927669_52016450 | 51941080 | C | T | splice_donor_variant others(1): Show |
HIGH | NA19082.hp1 | a0003 | a0003c0005 | a0003c0005t0012 | a0003c0005t0012g0021 | 1 | 302 | 0.0033 | 0 | c.355 others(6): Show |
ATP7B | ENSG00000123191.17 | transcript | ENST00000242839.10 | protein_coding | 16/20 | chr13 | TogoVar | ||||||
C1QTNF9_chr13_24304580_24327531 | 24318877 | C | T | stop_gained | HIGH | NA18974.hp1 NA18985.hp2 NA18989.hp1 others(2): Show |
a0008 | a0008c0009 | a0008c0009t0001 | a0008c0009t0001g0001a0008c0009t0001g0035a0008c0009t0001g0187 | 5 | 466 | 0.0107 | 0 | c.226 others(3): Show |
p.Arg others(3): Show |
C1QTNF9 | ENSG00000240654.6 | transcript | ENST00000332018.5 | protein_coding | 3/4 | 285/1824 | 226/1002 | 76/333 | chr13 | TogoVar | ||
C3orf49_chr3_63814299_63853636 | 63831135 | C | CACACT | frameshift_variant | HIGH | HG00621.hp2 HG00673.hp2 HG02027.hp2 others(17): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0004a0003c0003t0001g0027a0003c0003t0001g0052others(14): Show | 20 | 388 | 0.0516 | 5 | c.597 others(12): Show |
p.Phe others(5): Show |
C3orf49 | ENSG00000163632.15 | transcript | ENST00000295896.13 | protein_coding | 4/7 | 775/1355 | 602/879 | 201/292 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
CABIN1_chr22_24006304_24183628 | 24113620 | ACTTCTTT others(6): Show |
A | frameshift_variant | HIGH | NA19082.hp1 | a0011 | a0011c0021 | a0011c0021t0001 | a0011c0021t0001g0174 | 1 | 268 | 0.0037 | -13 | c.417 others(22): Show |
p.Phe others(6): Show |
CABIN1 | ENSG00000099991.18 | transcript | ENST00000263119.10 | protein_coding | 27/37 | 4312/7233 | 4174/6663 | 1392/2220 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |
CACNA1F_chrX_49200063_49238340 | 49231220 | GT | G | frameshift_variant | HIGH | NA19082.hp1 | a0018 | a0018c0028 | a0018c0028t0001 | a0018c0028t0001g0045 | 1 | 290 | 0.0035 | -1 | c.362 others(4): Show |
p.Asn others(5): Show |
CACNA1F | ENSG00000102001.13 | transcript | ENST00000323022.10 | protein_coding | 3/48 | 393/6006 | 362/5901 | 121/1966 | chrX | TogoVar | ||
CBX6_chr22_38856422_38877216 | 38866655 | C | CG | frameshift_variant | HIGH | HG00673.hp2 HG01358.hp1 HG02055.hp1 others(9): Show |
a0002 | a0002c0002a0002c0007 | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(8): Show | a0002c0002t0001g0082a0002c0002t0002g0147a0002c0002t0003g0042others(8): Show | 12 | 406 | 0.0296 | 1 | c.792 others(4): Show |
p.Ala others(5): Show |
CBX6 | ENSG00000183741.12 | transcript | ENST00000407418.8 | protein_coding | 5/5 | 818/6052 | 792/1239 | 264/412 | chr22 | TogoVar | ||
CCDC138_chr2_108781771_108881578 | 108788018 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00408.hp2 HG00738.hp1 others(76): Show |
a0002a0003a0004others(4): Show | a0002c0002a0003c0003a0004c0007others(4): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(7): Show | a0002c0002t0001g0127a0002c0002t0001g0128a0002c0002t0001g0129others(75): Show | 79 | 220 | 0.3591 | 1 | c.94- others(5): Show |
CCDC138 | ENSG00000163006.12 | transcript | ENST00000295124.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CCDC163_chr1_45488866_45505073 | 45499365 | AGATACAG others(58): Show |
A | frameshift_variant | HIGH | NA18944.hp1 NA18969.hp1 NA18971.hp2 others(7): Show |
a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0013a0003c0003t0006g0067a0003c0003t0006g0068others(1): Show | 10 | 408 | 0.0245 | -65 | c.92_ others(71): Show |
p.Pro others(4): Show |
CCDC163 | ENSG00000280670.3 | transcript | ENST00000629482.3 | protein_coding | 2/5 | 620/2095 | 92/438 | 31/145 | chr1 | TogoVar | ||
CDY1_chrY_25617117_25629902 | 25622628 | GA | G | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | -1 | c.192 others(4): Show |
p.Lys others(4): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 1/2 | 518/2366 | 192/1665 | 64/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CDY1_chrY_25617117_25629902 | 25622917 | CT | C | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | -1 | c.477 others(4): Show |
p.Glu others(5): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 1/2 | 803/2366 | 477/1665 | 159/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CDY1_chrY_25617117_25629902 | 25623461 | T | TC | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | 1 | c.102 others(5): Show |
p.Phe others(5): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 1/2 | 1347/2366 | 1021/1665 | 341/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CDY1_chrY_25617117_25629902 | 25623510 | TA | T | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | -1 | c.107 others(5): Show |
p.Asn others(5): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 1/2 | 1396/2366 | 1070/1665 | 357/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CDY1_chrY_25617117_25629902 | 25623722 | G | GT | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | 1 | c.128 others(5): Show |
p.Ser others(5): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 1/2 | 1609/2366 | 1283/1665 | 428/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CDY1_chrY_25617117_25629902 | 25624473 | TA | T | frameshift_variant | HIGH | NA19082.hp1 | a0004 | a0004c0005 | a0004c0005t0008 | a0004c0005t0008g0001 | 1 | 92 | 0.0109 | -1 | c.161 others(5): Show |
p.Ala others(5): Show |
CDY1 | ENSG00000172288.8 | transcript | ENST00000306609.5 | protein_coding | 2/2 | 1940/2366 | 1614/1665 | 538/554 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
CEL_chr9_133056981_133076861 | 133071270 | G | GC | frameshift_variant | HIGH | HG00408.hp2 HG00438.hp1 HG00544.hp1 others(42): Show |
a0001a0030 | a0001c0019a0001c0020a0001c0054others(40): Show | a0001c0019t0001a0001c0020t0001a0001c0054t0001others(40): Show | a0001c0019t0001g0001a0001c0019t0001g0003a0001c0020t0001g0001others(42): Show | 45 | 416 | 0.1082 | 1 | c.177 others(5): Show |
p.Val others(5): Show |
CEL | ENSG00000170835.17 | transcript | ENST00000372080.8 | protein_coding | 11/11 | 1799/2381 | 1777/2262 | 593/753 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
CEL_chr9_133056981_133076861 | 133071436 | CCCCCCCC others(25): Show |
C | frameshift_variant | HIGH | HG01243.hp1 HG04115.hp2 HG04228.hp1 others(5): Show |
a0001a0010a0014 | a0001c0074a0001c0075a0010c0031others(4): Show | a0001c0074t0001a0001c0075t0001a0010c0031t0001others(4): Show | a0001c0074t0001g0001a0001c0075t0001g0009a0010c0031t0001g0001others(4): Show | 8 | 416 | 0.0192 | -32 | c.194 others(41): Show |
p.Val others(5): Show |
CEL | ENSG00000170835.17 | transcript | ENST00000372080.8 | protein_coding | 11/11 | 1964/2381 | 1942/2262 | 648/753 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
CEL_chr9_133056981_133076861 | 133071533 | G | GC | frameshift_variant | HIGH | HG00280.hp2 HG00408.hp2 HG00423.hp1 others(179): Show |
a0001a0002a0004others(26): Show | a0001c0019a0001c0020a0001c0054others(112): Show | a0001c0019t0001a0001c0020t0001a0001c0054t0001others(112): Show | a0001c0019t0001g0001a0001c0019t0001g0003a0001c0020t0001g0001others(140): Show | 182 | 416 | 0.4375 | 1 | c.204 others(5): Show |
p.Val others(5): Show |
CEL | ENSG00000170835.17 | transcript | ENST00000372080.8 | protein_coding | 11/11 | 2063/2381 | 2041/2262 | 681/753 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
CFAP47_chrX_35914734_36390317 | 36085353 | A | AC | frameshift_variant | HIGH | NA19082.hp1 | a0025 | a0025c0066 | a0025c0066t0001 | a0025c0066t0001g0170 | 1 | 216 | 0.0046 | 1 | c.473 others(5): Show |
p.Gln others(6): Show |
CFAP47 | ENSG00000165164.14 | transcript | ENST00000378653.8 | protein_coding | 30/64 | 4802/9941 | 4736/9564 | 1579/3187 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
CFAP65_chr2_218997846_219046516 | 219021144 | CTAGGTAC others(20): Show |
C | frameshift_variant others(3): Show |
HIGH | NA19082.hp1 | a0023 | a0023c0027 | a0023c0027t0001 | a0023c0027t0001g0227 | 1 | 322 | 0.0031 | -27 | c.324 others(38): Show |
p.Tyr others(6): Show |
CFAP65 | ENSG00000181378.14 | transcript | ENST00000341552.10 | protein_coding | 19/35 | 3240/5778 | 1080/1925 | chr2 | TogoVar | |||
CFAP65_chr2_218997846_219046516 | 219021206 | T | A | stop_gained | HIGH | NA19082.hp1 | a0023 | a0023c0027 | a0023c0027t0001 | a0023c0027t0001g0227 | 1 | 322 | 0.0031 | 0 | c.320 others(4): Show |
p.Lys others(5): Show |
CFAP65 | ENSG00000181378.14 | transcript | ENST00000341552.10 | protein_coding | 19/35 | 3282/5946 | 3205/5778 | 1069/1925 | chr2 | TogoVar | ||
CFAP65_chr2_218997846_219046516 | 219021254 | T | TGCAGGGA others(3): Show |
frameshift_variant | HIGH | NA19082.hp1 | a0023 | a0023c0027 | a0023c0027t0001 | a0023c0027t0001g0227 | 1 | 322 | 0.0031 | 10 | c.315 others(19): Show |
p.Ser others(6): Show |
CFAP65 | ENSG00000181378.14 | transcript | ENST00000341552.10 | protein_coding | 19/35 | 3233/5946 | 3156/5778 | 1052/1925 | chr2 | TogoVar | ||
CHRM1_chr11_62903679_62926363 | 62910396 | A | AC | frameshift_variant | HIGH | HG00639.hp2 HG01099.hp2 HG01106.hp2 others(12): Show |
a0002 | a0002c0004a0002c0007 | a0002c0004t0001a0002c0004t0003a0002c0007t0001 | a0002c0004t0001g0058a0002c0004t0001g0064a0002c0004t0001g0088others(12): Show | 15 | 420 | 0.0357 | 1 | c.704 others(4): Show |
p.Gly others(5): Show |
CHRM1 | ENSG00000168539.4 | transcript | ENST00000306960.4 | protein_coding | 2/2 | 928/2646 | 704/1383 | 235/460 | chr11 | TogoVar | ||
CLUH_chr17_2684387_2716764 | 2698290 | GGGCCGTG others(19): Show |
G | frameshift_variant | HIGH | NA19082.hp1 | a0018 | a0018c0026 | a0018c0026t0001 | a0018c0026t0001g0063 | 1 | 420 | 0.0024 | -26 | c.154 others(35): Show |
p.Asp others(5): Show |
CLUH | ENSG00000132361.18 | transcript | ENST00000651024.2 | protein_coding | 10/26 | 1669/5357 | 1541/4047 | 514/1348 | chr17 | TogoVar |