Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02970	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0022	ESN	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02970	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0095	ESN	AFR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	ESN	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02970	hp2	a0039	a0039c0037	a0039c0037t0006	a0039c0037t0006g0166	ESN	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02970	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	ESN	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02970	hp2	a0014	a0014c0019	a0014c0019t0002	a0014c0019t0002g0043	ESN	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02970	hp1	a0002	a0002c0002	a0002c0002t0000	a0002c0002t0000g0147	ESN	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02970	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0065	ESN	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02970	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0377	ESN	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02970	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0287	ESN	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0082	ESN	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	ESN	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	ESN	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	ESN	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02970	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0019	ESN	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0062	ESN	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02970	hp1	a0001	a0001c0001	a0001c0001t0033	a0001c0001t0033g0006	ESN	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	ESN	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02970	hp1	a0004	a0004c0010	a0004c0010t0012	a0004c0010t0012g0013	ESN	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02970	hp2	a0005	a0005c0006	a0005c0006t0006	a0005c0006t0006g0007	ESN	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	ESN	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	ESN	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	ESN	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0009	ESN	AFR	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG02970	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0090	ESN	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0026	ESN	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02970	hp1	a0001	a0001c0004	a0001c0004t0014	a0001c0004t0014g0063	ESN	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02970	hp2	a0001	a0001c0001	a0001c0001t0104	a0001c0001t0104g0292	ESN	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02970	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0085	ESN	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02970	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0092	ESN	AFR	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	ESN	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	ESN	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0138	ESN	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02970	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0005	ESN	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02970	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0009	ESN	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	ESN	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02970	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0054	ESN	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02970	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0352	ESN	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02970	hp1	a0002	a0002c0003	a0002c0003t0008	a0002c0003t0008g0017	ESN	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	ESN	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0139	ESN	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	ESN	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	ESN	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02970	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0107	ESN	AFR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02970	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0012	ESN	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	ESN	AFR	AASS	chr7	122068549	122149249
AATF_chr17_36943954_37061871	HG02970	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	ESN	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02970	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	ESN	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02970	hp1	a0009	a0009c0019	a0009c0019t0004	a0009c0019t0004g0238	ESN	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02970	hp2	a0025	a0025c0070	a0025c0070t0004	a0025c0070t0004g0183	ESN	AFR	AATK	chr17	81112295	81171221