Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02647	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0015	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02647	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0240	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	GWD	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02647	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0069	GWD	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02647	hp2	a0006	a0006c0069	a0006c0069t0002	a0006c0069t0002g0359	GWD	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02647	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0037	GWD	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	GWD	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02647	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0019	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02647	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0123	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02647	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0395	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02647	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0393	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02647	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0013	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02647	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0063	GWD	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02647	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0094	GWD	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02647	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0137	GWD	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02647	hp1	a0002	a0002c0002	a0002c0002t0019	a0002c0002t0019g0004	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02647	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0066	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02647	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0098	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02647	hp2	a0007	a0007c0017	a0007c0017t0049	a0007c0017t0049g0057	GWD	AFR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02647	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0018	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	GWD	AFR	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG02647	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0065	GWD	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	GWD	AFR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02647	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0218	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02647	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0352	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02647	hp1	a0005	a0005c0005	a0005c0005t0007	a0005c0005t0007g0007	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	GWD	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0332	GWD	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02647	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0357	GWD	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	GWD	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	GWD	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02647	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02647	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02647	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0017	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02647	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0019	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02647	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0322	GWD	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02647	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0220	GWD	AFR	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	HG02647	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0094	GWD	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02647	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0244	GWD	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02647	hp1	a0018	a0018c0072	a0018c0072t0001	a0018c0072t0001g0322	GWD	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02647	hp2	a0003	a0003c0027	a0003c0027t0001	a0003c0027t0001g0281	GWD	AFR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG02647	hp1	a0007	a0007c0008	a0007c0008t0007	a0007c0008t0007g0336	GWD	AFR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02647	hp2	a0005	a0005c0014	a0005c0014t0001	a0005c0014t0001g0139	GWD	AFR	ABCA10	chr17	69143007	69233824