Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02818	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02818	hp2	a0010	a0010c0009	a0010c0009t0001	a0010c0009t0001g0054	GWD	AFR	A1BG	chr19	58340183	58358492
A3GALT2_chr1_33301766_33326098	HG02818	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0045	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02818	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0031	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02818	hp1	a0004	a0004c0005	a0004c0005t0010	a0004c0005t0010g0274	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02818	hp2	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0245	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02818	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0046	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	GWD	AFR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG02818	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0091	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02818	hp2	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0089	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02818	hp1	a0004	a0004c0007	a0004c0007t0015	a0004c0007t0015g0144	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02818	hp2	a0015	a0015c0028	a0015c0028t0002	a0015c0028t0002g0075	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02818	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0051	GWD	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0235	GWD	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02818	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0069	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02818	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0182	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	GWD	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0345	GWD	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02818	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0018	GWD	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02818	hp1	a0001	a0001c0006	a0001c0006t0028	a0001c0006t0028g0126	GWD	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02818	hp2	a0001	a0001c0001	a0001c0001t0037	a0001c0001t0037g0009	GWD	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02818	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0109	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02818	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	GWD	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02818	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0128	GWD	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02818	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0003	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	GWD	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0036	GWD	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02818	hp2	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0151	GWD	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02818	hp1	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0030	GWD	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02818	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0007	GWD	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02818	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0056	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02818	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG02818	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0047	GWD	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02818	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0056	GWD	AFR	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	HG02818	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0345	GWD	AFR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02818	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0352	GWD	AFR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02818	hp1	a0005	a0005c0005	a0005c0005t0004	a0005c0005t0004g0184	GWD	AFR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02818	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0163	GWD	AFR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02818	hp1	a0003	a0003c0014	a0003c0014t0002	a0003c0014t0002g0101	GWD	AFR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02818	hp2	a0002	a0002c0007	a0002c0007t0017	a0002c0007t0017g0012	GWD	AFR	ABCA12	chr2	214926542	215143626