Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	HG01256	hp1	a0003	a0003c0005	a0003c0005t0003	a0003c0005t0003g0082	CLM	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01256	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0113	CLM	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0167	CLM	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01256	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0052	CLM	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01256	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0213	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01256	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0020	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01256	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0302	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01256	hp2	a0001	a0001c0002	a0001c0002t0012	a0001c0002t0012g0022	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0165	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	CLM	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01256	hp1	a0001	a0001c0001	a0001c0001t0022	a0001c0001t0022g0011	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01256	hp2	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0004	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0076	CLM	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	CLM	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01256	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	CLM	AMR	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0288	CLM	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG01256	hp2	a0002	a0002c0002	a0002c0002t0014	a0002c0002t0014g0094	CLM	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0360	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01256	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0043	CLM	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	CLM	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01256	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0002	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	CLM	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01256	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0194	CLM	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01256	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0217	CLM	AMR	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01256	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01256	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0241	CLM	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01256	hp1	a0008	a0008c0010	a0008c0010t0002	a0008c0010t0002g0308	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01256	hp2	a0003	a0003c0020	a0003c0020t0001	a0003c0020t0001g0008	CLM	AMR	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	HG01256	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0094	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01256	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	HG01256	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0004	CLM	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	CLM	AMR	ABCA2	chr9	137002234	137033237
ABCA6_chr17_69073702_69146895	HG01256	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0179	CLM	AMR	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	CLM	AMR	ABCA6	chr17	69073702	69146895
ABCB10_chr1_229511582_229563707	HG01256	hp1	a0006	a0006c0007	a0006c0007t0002	a0006c0007t0002g0060	CLM	AMR	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	HG01256	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	CLM	AMR	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	HG01256	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0084	CLM	AMR	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	HG01256	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0201	CLM	AMR	ABCB11	chr2	168915781	169036324