Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0237	CLM	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01258	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0016	CLM	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01258	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0062	CLM	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01258	hp2	a0023	a0023c0033	a0023c0033t0001	a0023c0033t0001g0006	CLM	AMR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG01258	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	CLM	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01258	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0020	CLM	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01258	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0304	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01258	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0373	CLM	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	CLM	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	CLM	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CLM	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	CLM	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01258	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0322	CLM	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01258	hp2	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0004	CLM	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	CLM	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	CLM	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01258	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	CLM	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01258	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	CLM	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	CLM	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	CLM	AMR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG01258	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0207	CLM	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01258	hp2	a0002	a0002c0002	a0002c0002t0013	a0002c0002t0013g0144	CLM	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CLM	AMR	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01258	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0002	CLM	AMR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG01258	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	CLM	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	CLM	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CLM	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01258	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0295	CLM	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01258	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	CLM	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01258	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	CLM	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01258	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0246	CLM	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01258	hp1	a0003	a0003c0020	a0003c0020t0001	a0003c0020t0001g0008	CLM	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01258	hp2	a0016	a0016c0026	a0016c0026t0001	a0016c0026t0001g0011	CLM	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01258	hp1	a0001	a0001c0003	a0001c0003t0005	a0001c0003t0005g0233	CLM	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01258	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0254	CLM	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01258	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01258	hp2	a0002	a0002c0015	a0002c0015t0001	a0002c0015t0001g0003	CLM	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01258	hp1	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0087	CLM	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01258	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0025	CLM	AMR	ABCA12	chr2	214926542	215143626