Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01975	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0012	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01975	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0005	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01975	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0250	PEL	AMR	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG01975	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0345	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01975	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	PEL	AMR	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01975	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0309	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01975	hp2	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0007	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01975	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0175	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	PEL	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01975	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0023	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01975	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PEL	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0160	PEL	AMR	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	HG01975	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0213	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01975	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0244	PEL	AMR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0206	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0306	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01975	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01975	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0170	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01975	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PEL	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01975	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01975	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	PEL	AMR	AARSD1	chr17	42945526	42969454
AASS_chr7_122068549_122149249	HG01975	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0183	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01975	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0146	PEL	AMR	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	HG01975	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0071	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01975	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0250	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01975	hp1	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0319	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01975	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0269	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG01975	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0127	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01975	hp2	a0002	a0002c0027	a0002c0027t0003	a0002c0027t0003g0073	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG01975	hp1	a0010	a0010c0033	a0010c0033t0003	a0010c0033t0003g0071	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01975	hp2	a0012	a0012c0043	a0012c0043t0002	a0012c0043t0002g0098	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG01975	hp1	a0010	a0010c0007	a0010c0007t0002	a0010c0007t0002g0015	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01975	hp2	a0001	a0001c0035	a0001c0035t0009	a0001c0035t0009g0071	PEL	AMR	ABCA1	chr9	104776006	104933155