Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01993	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	PEL	AMR	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG01993	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0195	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01993	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0060	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01993	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0098	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01993	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0038	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG01993	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0096	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01993	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0029	PEL	AMR	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG01993	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0127	PEL	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01993	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0308	PEL	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01993	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PEL	AMR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01993	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01993	hp2	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0002	PEL	AMR	AADAC	chr3	151809116	151833488
AAMDC_chr11_77816144_77877352	HG01993	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0032	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0297	PEL	AMR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	PEL	AMR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0049	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01993	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0168	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01993	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG01993	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0103	PEL	AMR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01993	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0010	PEL	AMR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG01993	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0273	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01993	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0239	PEL	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG01993	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0016	PEL	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01993	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	PEL	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG01993	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0257	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01993	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0349	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	HG01993	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0122	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01993	hp2	a0007	a0007c0034	a0007c0034t0005	a0007c0034t0005g0169	PEL	AMR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG01993	hp1	a0031	a0031c0092	a0031c0092t0004	a0031c0092t0004g0095	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01993	hp2	a0010	a0010c0033	a0010c0033t0003	a0010c0033t0003g0060	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG01993	hp1	a0021	a0021c0060	a0021c0060t0001	a0021c0060t0001g0078	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01993	hp2	a0010	a0010c0007	a0010c0007t0002	a0010c0007t0002g0125	PEL	AMR	ABCA1	chr9	104776006	104933155