Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	HG00733	hp1	a0003	a0003c0005	a0003c0005t0003	a0003c0005t0003g0083	PUR	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00733	hp2	a0003	a0003c0023	a0003c0023t0003	a0003c0023t0003g0321	PUR	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	PUR	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00733	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0096	PUR	AMR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00733	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0020	PUR	AMR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00733	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0146	PUR	AMR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG00733	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0043	PUR	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00733	hp2	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0257	PUR	AMR	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0278	PUR	AMR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0159	PUR	AMR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00733	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0008	PUR	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	PUR	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0092	PUR	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	PUR	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG00733	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	PUR	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00733	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	PUR	AMR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0183	PUR	AMR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	PUR	AMR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG00733	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0168	PUR	AMR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG00733	hp2	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0006	PUR	AMR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG00733	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0044	PUR	AMR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00733	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0254	PUR	AMR	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00733	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	PUR	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PUR	AMR	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	HG00733	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0298	PUR	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00733	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0281	PUR	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG00733	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0089	PUR	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PUR	AMR	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	HG00733	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0004	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PUR	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG00733	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0214	PUR	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	PUR	AMR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG00733	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0016	PUR	AMR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG00733	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0180	PUR	AMR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG00733	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0295	PUR	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0058	PUR	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG00733	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0046	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG00733	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0007	PUR	AMR	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	HG00733	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PUR	AMR	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	HG00733	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0229	PUR	AMR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG00733	hp2	a0028	a0028c0074	a0028c0074t0002	a0028c0074t0002g0243	PUR	AMR	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	HG00733	hp1	a0005	a0005c0005	a0005c0005t0002	a0005c0005t0002g0130	PUR	AMR	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG00733	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	PUR	AMR	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	HG00733	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0033	PUR	AMR	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	HG00733	hp2	a0008	a0008c0019	a0008c0019t0001	a0008c0019t0001g0156	PUR	AMR	ABCA8	chr17	68862289	68960392